当前解析结果
SmilChr07G001167| 统一新 Gene ID | SmilChr07G001167 |
|---|---|
| 名称 | SmilChr07G001167 |
| 描述 | cytochrome P450 734A1-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 8751528 - 8754557 / - |
| NCBI Gene ID | LOC130992343 |
|---|---|
| GeneID | 130992343 |
| locus_tag | - |
| NCBI Name | LOC130992343 |
| 原始查询 | SmilChr07G001167 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | cytochrome P450 734A1-like |
| 产物 | cytochrome P450 734A1-like |
| Arabidopsis | AT2G26710 (BAS1)Cytochrome P450 superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817212] identity=63.8; qcov=0.989; evalue=0; confidence=high |
| Rice | Os02g0204700 (OsCYP734A2)- identity=56.4; qcov=0.971; evalue=0; confidence=high |
| GO | GO:0004497 (monooxygenase activity); GO:0005506 (iron ion binding); GO:0010268 (brassinosteroid homeostasis); GO:0016131 (brassinosteroid metabolic process); GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen); GO:0020037 (heme binding) |
| KEGG | smil00905 (Brassinosteroid biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF00067 (p450) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992343 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057772928.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.80000 | XP_057772928.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057772928.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057772928.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057772928.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:8752109 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A3,B80,D5 |
Chr7:8752130 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:8752316 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A15 |
Chr7:8752822 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C2,D7 |
Chr7:8752831 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr7:8753009 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C75 |
Chr7:8753393 |
T |
TC |
1bp_insertion | frameshift_variant | 76 | A10,A11,A14,A21,A23,A24,A6,A7,B100,B101,B103,B11,B12,B122,B124,B126,B128,B134,B136,B14,B15,B17,B25,B27,B28,B29,B30,B32,B35,B36,B49,B55,B58,B6,B61,B69,B72,B73,B76,B77,B78,B82,B86,B90,B91,B92,B94,C10,C13,C16,C18,C19,C21,C25,C29,C30,C31,C34,C37,C4,C43,C57,C63,C64,C66,C67,C7,C70,C72,C79,C82,C84,C85,D10,D6,D8 |
Chr7:8753395 |
CT |
C |
1bp_deletion | frameshift_variant | 76 | A10,A11,A14,A21,A23,A24,A6,A7,B100,B101,B103,B11,B12,B122,B124,B126,B128,B134,B136,B14,B15,B17,B25,B27,B28,B29,B30,B32,B35,B36,B49,B55,B58,B6,B61,B69,B72,B73,B76,B77,B78,B82,B86,B90,B91,B92,B94,C10,C13,C16,C18,C19,C21,C25,C29,C30,C31,C34,C37,C4,C43,C57,C63,C64,C66,C67,C7,C70,C72,C79,C82,C84,C85,D10,D6,D8 |
Chr7:8753552 |
TTC |
T |
2bp_deletion | frameshift_variant | 1 | C77 |
Chr7:8753552 |
TTC |
T |
2bp_deletion | CDS_variant | 1 | C77 |
Chr7:8753581 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A21,B101,B12,B55 |
Chr7:8753608 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B58,D10 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057772928.1PF00067
p450 85-503 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057772928.1 |
Pfam | PF00067 |
p450 | Domain | 85 | 503 | 2.9e-87 | 294.1 | Cytochrome P450 |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。