当前解析结果
SmilChr07G001192| 统一新 Gene ID | SmilChr07G001192 |
|---|---|
| 名称 | SmilChr07G001192 |
| 描述 | uncharacterized SmilChr07G001192 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 9055048 - 9071046 / + |
| NCBI Gene ID | LOC130992371 |
|---|---|
| GeneID | 130992371 |
| locus_tag | - |
| NCBI Name | LOC130992371 |
| 原始查询 | SmilChr07G001192 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:816732]; symbol=AT2G21960; hit=AT2G21960; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:816732]; symbol=AT2G21960; hit=AT2G21960; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G21960 (AT2G21960)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:816732] identity=84.4; qcov=0.871; evalue=4e-81; confidence=high |
| Rice | Os09g0436500 (OJ1238_G07.17-1)- identity=60.9; qcov=0.89; evalue=4.24e-54; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992371 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 0.60000 | XP_057772953.1 |
| 2 | Chloroplast membrane | 叶绿体膜 | 0.60000 | XP_057772953.1 |
| 3 | Mitochondrion | 线粒体 | 0.40000 | XP_057772953.1 |
| 4 | Mitochondrion membrane | 线粒体膜 | 0.40000 | XP_057772953.1 |
| 5 | Chloroplast thylakoid | 类囊体 | 0.40000 | XP_057772953.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:9055565 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B80 |
Chr7:9055590 |
G |
A |
EMS_canonical_SNV | stop_gained | 15 | A19,B102,B105,B109,B11,B137,B20,B51,B6,B64,B81,C24,C26,C35,C44 |
Chr7:9055729 |
ATC |
A |
2bp_deletion | frameshift_variant | 1 | C14 |
Chr7:9055729 |
ATC |
A |
2bp_deletion | CDS_variant | 1 | C14 |
Chr7:9055733 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B48 |
Chr7:9055754 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A5,B3,B81,C41,C46 |
Chr7:9055767 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C31 |
Chr7:9055769 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C57,C81 |
Chr7:9055792 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B109,C24,C35 |
Chr7:9055960 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B136,C87 |
Chr7:9055981 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A10,B136,C46,C87 |
Chr7:9056189 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | C20 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。