当前解析结果
SmilChr07G001299| 统一新 Gene ID | SmilChr07G001299 |
|---|---|
| 名称 | SmilChr07G001299 |
| 描述 | uncharacterized SmilChr07G001299 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 9970327 - 9974116 / + |
| NCBI Gene ID | LOC130992465 |
|---|---|
| GeneID | 130992465 |
| locus_tag | - |
| NCBI Name | LOC130992465 |
| 原始查询 | SmilChr07G001299 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DNA-directed RNA polymerase subunit beta [Source:NCBI gene (formerly Entrezgene);Acc:820866]; symbol=AT3G16200; hit=AT3G16200; species=arabidopsis; confidence=high |
| 产物 | DNA-directed RNA polymerase subunit beta [Source:NCBI gene (formerly Entrezgene);Acc:820866]; symbol=AT3G16200; hit=AT3G16200; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G16200 (AT3G16200)DNA-directed RNA polymerase subunit beta [Source:NCBI gene (formerly Entrezgene);Acc:820866] identity=72; qcov=0.998; evalue=0; confidence=high |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992465 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Golgi apparatus | 高尔基体 | 1.00000 | XP_057773085.1 |
| 2 | Golgi stack | 高尔基堆 | 0.20000 | XP_057773085.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057773085.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057773085.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057773085.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:9970438 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B121 |
Chr7:9970574 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C48,C82 |
Chr7:9970709 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr7:9971568 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B115,B12,C3,C51,D1 |
Chr7:9971633 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A6,C48,C82 |
Chr7:9971655 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B134,B53 |
Chr7:9971666 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B123,B75,C39,C43,C71 |
Chr7:9971678 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C30 |
Chr7:9971693 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B86 |
Chr7:9971892 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B114 |
Chr7:9972218 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B129,D11 |
Chr7:9973949 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B86 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。