Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G001336`

染色体: Chr07 坐标: 10323936-10330081 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G001336`
名称	SmilChr07G001336
描述	ABC transporter G family member 35-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	10323936 - 10330081 / `+`

ID 对照

NCBI Gene ID	`LOC130992499`
GeneID	`130992499`
locus_tag	`-`
NCBI Name	`LOC130992499`
原始查询	`SmilChr07G001336`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	ABC transporter G family member 35-like
产物	ABC transporter G family member 35-like
Arabidopsis	`AT1G15210` (ABCG35) pleiotropic drug resistance 7 [Source:NCBI gene (formerly Entrezgene);Acc:838087] identity=64; qcov=0.975; evalue=0; confidence=high
Rice	`Os06g0554800` (OsABCG42) - identity=65.8; qcov=0.821; evalue=0; confidence=high
GO	GO:0005524 (ATP binding); GO:0016020 (membrane); GO:0016887 (ATP hydrolysis activity); GO:0140359 (ABC-type transporter activity)
KEGG	smil02010 (ABC transporters - Salvia miltiorrhiza (redroot sage))
Pfam	PF00005 (ABC_tran); PF01061 (ABC2_membrane); PF08370 (PDR_assoc); PF19055 (ABC2_membrane_7)
InterPro	-
eggNOG	-
NR	GeneID:130992499

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057773134.1`
2	Vacuole membrane	液泡膜	0.40000	`XP_057773136.1`
3	Endoplasmic reticulum	内质网	0.20000	`XP_057773136.1`
4	Vacuole	液泡	0.20000	`XP_057773136.1`
5	Nucleus	细胞核	0.00000	`XP_057773134.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:10324394`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B95,D4
`Chr7:10324591`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B2
`Chr7:10324635`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	C2,C39,C42,C46,D10
`Chr7:10324745`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B34
`Chr7:10324817`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C83
`Chr7:10324865`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A18,B82,B84
`Chr7:10324869`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B78,B82
`Chr7:10325097`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B80
`Chr7:10325118`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B77
`Chr7:10325454`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D5
`Chr7:10325502`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B3,B95,C15
`Chr7:10325526`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C71

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057773134.1

1348 aa

674

1348

ABC_tran

ABC2_membrane_7

ABC2_membrane

PDR_assoc

ABC_tran

ABC2_membrane

PF00005 ABC_tran 83-252 aa PF19055 ABC2_membrane_7 285-337 aa PF01061 ABC2_membrane 408-617 aa PF08370 PDR_assoc 623-687 aa PF00005 ABC_tran 774-926 aa PF01061 ABC2_membrane 1072-1285 aa

XP_057773136.1

1237 aa

618

1237

ABC_tran

ABC2_membrane_7

ABC2_membrane

PDR_assoc

ABC_tran

ABC2_membrane

PF00005 ABC_tran 83-252 aa PF19055 ABC2_membrane_7 285-337 aa PF01061 ABC2_membrane 408-617 aa PF08370 PDR_assoc 623-687 aa PF00005 ABC_tran 774-926 aa PF01061 ABC2_membrane 1072-1196 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057773134.1`	Pfam	`PF00005`	ABC_tran	Domain	83	252	9e-40	137.2	ABC transporter
`XP_057773134.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	285	337	3e-14	53.4	ABC-2 type transporter
`XP_057773134.1`	Pfam	`PF01061`	ABC2_membrane	Domain	408	617	4.8e-102	340.7	ABC-2 type transporter
`XP_057773134.1`	Pfam	`PF08370`	PDR_assoc	Family	623	687	7.3e-25	87.2	Plant PDR ABC transporter associated
`XP_057773134.1`	Pfam	`PF00005`	ABC_tran	Domain	774	926	9e-40	137.2	ABC transporter
`XP_057773134.1`	Pfam	`PF01061`	ABC2_membrane	Domain	1072	1285	4.8e-102	340.7	ABC-2 type transporter
`XP_057773136.1`	Pfam	`PF00005`	ABC_tran	Domain	83	252	7.1e-40	137.5	ABC transporter
`XP_057773136.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	285	337	3.3e-15	56.6	ABC-2 type transporter
`XP_057773136.1`	Pfam	`PF01061`	ABC2_membrane	Domain	408	617	5.8e-78	262.0	ABC-2 type transporter
`XP_057773136.1`	Pfam	`PF08370`	PDR_assoc	Family	623	687	2.3e-25	88.8	Plant PDR ABC transporter associated
`XP_057773136.1`	Pfam	`PF00005`	ABC_tran	Domain	774	926	7.1e-40	137.5	ABC transporter
`XP_057773136.1`	Pfam	`PF01061`	ABC2_membrane	Domain	1072	1196	5.8e-78	262.0	ABC-2 type transporter

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057917153.1
TTTCTTTTCTTGTCTTTGTATAATAAAATCAATGCTAAAAAAGAAAGTGACCTTCCACCAGCAGCACGCAACTTCATCTCAATCATGCACACTTATGGTTTAATTCTCCTTTATTTGCAGCTTCAATGTAGTTAGCATGCCACGCTCTTGAAAATCTTGAAGAAGAACGAGTACGAGTTCTAGAGCAATGTCGAGGCAGAGCAGTCAAGATGATGAGGACTTTTTTAGGACAATTACTAGTAGAATTGATGAAGAAGGGG...

XM_057917151.1
TCTTTTCTTGTCTTTGTATAATAAAATCAATGCTAAAAAAGAAAGTGACCTTCCACCAGCAGCACGCAACTTCATCTCAATCATGCACACTTATGGTTTAATTCTCCTTTATTTGCAGCTTCAATGTAGTTAGCATGCCACGCTCTTGAAAATCTTGAAGAAGAACGAGTACGAGTTCTAGAGCAATGTCGAGGCAGAGCAGTCAAGATGATGAGGACTTTTTTAGGACAATTACTAGTAGAATTGATGAAGAAGGGGCT...

CDS

2 records

下载 CDS FASTA

LOC130992499
ATGTCGAGGCAGAGCAGTCAAGATGATGAGGACTTTTTTAGGACAATTACTAGTAGAATTGATGAAGAAGGGGCTGGAGTTGCTGGTATAGAAGTGAGGTTTGAGAACTTGAGCGTTGAGGTGGATTGCTTTGTGGGAGAAAGAGCTCTCCCTACGCTGCCAAATGTTGCGCGTAACATTGCAGAGACGGCCTTGAGTTGCTTCGGGGTGAAGCTGGCTGACAGAGCAAAGCTTCACATATTGAAACACAATTCTGGGAT...

Protein

2 records

下载 Protein FASTA

XP_057773134.1
MSRQSSQDDEDFFRTITSRIDEEGAGVAGIEVRFENLSVEVDCFVGERALPTLPNVARNIAETALSCFGVKLADRAKLHILKHNSGIIKPSRMTLLLGPPSCGKTTLLLALAGRLGLSPSLKASGEITYNGHKLNEFVPQKTAAYVSQNDVHVAEMTVGETLDFSARCQGVGSRYDFFKDITNADADLSMKATAVEGFGSTDYVLKILGLDECRDTIVGDQMLRGISGGQKKCLTIGEMIVGPSKVMLLDEISTGLDSST...

XP_057773136.1
MSRQSSQDDEDFFRTITSRIDEEGAGVAGIEVRFENLSVEVDCFVGERALPTLPNVARNIAETALSCFGVKLADRAKLHILKHNSGIIKPSRMTLLLGPPSCGKTTLLLALAGRLGLSPSLKASGEITYNGHKLNEFVPQKTAAYVSQNDVHVAEMTVGETLDFSARCQGVGSRYDFFKDITNADADLSMKATAVEGFGSTDYVLKILGLDECRDTIVGDQMLRGISGGQKKCLTIGEMIVGPSKVMLLDEISTGLDSST...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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