Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G001458`

染色体: Chr07 坐标: 11424693-11427448 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G001458`
名称	SmilChr07G001458
描述	uncharacterized SmilChr07G001458
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	11424693 - 11427448 / `+`

ID 对照

NCBI Gene ID	`LOC130992651`
GeneID	`130992651`
locus_tag	`-`
NCBI Name	`LOC130992651`
原始查询	`SmilChr07G001458`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:843666]; symbol=AT1G73320; hit=AT1G73320; species=arabidopsis; confidence=high
产物	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:843666]; symbol=AT1G73320; hit=AT1G73320; species=arabidopsis; confidence=high
Arabidopsis	`AT1G73320` (AT1G73320) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:843666] identity=67.5; qcov=0.804; evalue=1.3e-115; confidence=high
Rice	`Os06g0101100` - identity=58.5; qcov=0.869; evalue=2.56e-105; confidence=high
GO	-
KEGG	-
Pfam	PF10294 (Methyltransf_16)
InterPro	-
eggNOG	-
NR	GeneID:130992651

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057773370.1`
2	Cytoplasm	细胞质	0.80000	`XP_057773370.1`
3	Nucleus	细胞核	0.60000	`XP_057773371.1`
4	Chromosome	染色体	0.00000	`XP_057773370.1`
5	Centromere	着丝粒	0.00000	`XP_057773370.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:11424766`	`G`	`GT`	1bp_insertion	frameshift_variant	75	A1,A16,A20,A23,A25,A8,A9,B10,B102,B106,B107,B111,B117,B122,B123,B137,B139,B17,B18,B20,B21,B23,B24,B36,B37,B4,B42,B43,B47,B52,B57,B58,B6,B60,B66,B67,B7,B70,B74,B75,B78,B8,B81,B82,B85,B90,B92,B94,B98,B99,C1,C15,C2,C20,C21,C22,C26,C3,C33,C37,C40,C41,C45,C46,C48,C53,C55,C62,C64,C65,C66,C67,C70,C76,D2
`Chr7:11424879`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C18
`Chr7:11426478`	`A`	`ACC`	2bp_insertion	frameshift_variant	115	A10,A11,A13,A14,A18,A19,A2,A21,A25,A9,B1,B10,B101,B102,B103,B105,B109,B11,B110,B113,B114,B118,B119,B12,B120,B124,B126,B128,B130,B131,B132,B136,B138,B139,B14,B15,B27,B29,B30,B31,B34,B37,B38,B39,B40,B45,B46,B48,B53,B54,B55,B56,B61,B63,B64,B65,B7,B70,B72,B74,B78,B80,B83,B85,B88,B90,B91,B92,B93,B96,B97,C10,C12,C14,C18,C19,C20,C21,C23,C24,C25,C31,C32,C34,C35,C36,C38,C40,C43,C44,C47,C49,C50,C51,C52,C56,C60,C61,C64,C66,C68,C73,C76,C77,C8,C81,C82,C85,C87,C9,D1,D10,D11,D3,D9
`Chr7:11426486`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C15
`Chr7:11426864`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B104,B123
`Chr7:11426876`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr7:11426899`	`GGC`	`G`	2bp_deletion	frameshift_variant	1	D11
`Chr7:11426899`	`GGC`	`G`	2bp_deletion	CDS_variant	1	D11
`Chr7:11426949`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C61

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057773370.1

295 aa

148

295

Methyltransf_16

PF10294 Methyltransf_16 109-249 aa

XP_057773371.1

291 aa

146

291

Methyltransf_16

PF10294 Methyltransf_16 109-257 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057773370.1`	Pfam	`PF10294`	Methyltransf_16	Family	109	249	6.6e-35	121.1	Lysine methyltransferase
`XP_057773371.1`	Pfam	`PF10294`	Methyltransf_16	Family	109	257	6.3e-36	124.5	Lysine methyltransferase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057917388.1
ATTAGTTGAAGGGGAAAAAAAAGTTGAAAACGGAAGAATGAGCAGGCAAATGAGAATGAGCATAAATGATAGCGTTGCCTAAATTTATAACAACGCTGATGCACAGAATACCGATGGCGGGAAACGCAGAAGAACCGCCGCCGCCGACGGTGGCGGCGGAGGAGGAGGAGACGGAGAACTTGGTGGCGGAGCTAGGCTCGTACAAGGGCCGGGTCAGATTAGTAAGCGATTGTGAAGAAGAAATTATGCTGCTCTGGGCA...

XM_057917387.1
AAAACGGAAGAATGAGCAGGCAAATGAGAATGAGCATAAATGATAGCGTTGCCTAAATTTATAACAACGCTGATGCACAGAATACCGATGGCGGGAAACGCAGAAGAACCGCCGCCGCCGACGGTGGCGGCGGAGGAGGAGGAGACGGAGAACTTGGTGGCGGAGCTAGGCTCGTACAAGGGCCGGGTCAGATTAGTAAGCGATTGTGAAGAAGAAATTATGCTGCTCTGGGCAATCCAGCAGCCCATTTTCTCCAAGAA...

CDS

2 records

下载 CDS FASTA

LOC130992651
ATGATAGCGTTGCCTAAATTTATAACAACGCTGATGCACAGAATACCGATGGCGGGAAACGCAGAAGAACCGCCGCCGCCGACGGTGGCGGCGGAGGAGGAGGAGACGGAGAACTTGGTGGCGGAGCTAGGCTCGTACAAGGGCCGGGTCAGATTAGTAAGCGATTGTGAAGAAGAAATTATGCTGCTCTGGGCAATCCAGCAGCCCATTTTCTCCAAGAACAATGCTTTTGTCAATCAATCATCTCTTCAACTCAAAAT...

Protein

2 records

下载 Protein FASTA

XP_057773370.1
MIALPKFITTLMHRIPMAGNAEEPPPPTVAAEEEETENLVAELGSYKGRVRLVSDCEEEIMLLWAIQQPIFSKNNAFVNQSSLQLKIDACGHLLSILQSPSSLGTPGVTGAVMWDSGIILGKFLEHSVESGMILLQGKNVVELGSGCGLVGCIAALLGAHVILTDLPDRLKLLKKNVETNLYGDPRGSARVEELTWGDDLDKDFTDPLPDFVLGSDVVYSEGAVTDLMETLVELCGEQTTVILAGELRNVDVTDAILEYF...

XP_057773371.1
MIALPKFITTLMHRIPMAGNAEEPPPPTVAAEEEETENLVAELGSYKGRVRLVSDCEEEIMLLWAIQQPIFSKNNAFVNQSSLQLKIDACGHLLSILQSPSSLGTPGVTGAVMWDSGIILGKFLEHSVESGMILLQGKNVVELGSGCGLVGCIAALLGAHVILTDLPDRLKLLKKNVETNLYGDPRGSARVEELTWGDDLDKDFTDPLPDFVLGSDVVYSEGAVTDLMETLVELCGEQTTVILAGELRNDAILEYFLEAA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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