当前解析结果
SmilChr07G001477| 统一新 Gene ID | SmilChr07G001477 |
|---|---|
| 名称 | SmilChr07G001477 |
| 描述 | uncharacterized SmilChr07G001477 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 11623044 - 11628360 / + |
| NCBI Gene ID | LOC130992548 |
|---|---|
| GeneID | 130992548 |
| locus_tag | - |
| NCBI Name | LOC130992548 |
| 原始查询 | SmilChr07G001477 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Pentatricopeptide repeat (PPR) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:827060]; symbol=AT4G14200; hit=AT4G14200; species=arabidopsis; confidence=weak |
| 产物 | Pentatricopeptide repeat (PPR) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:827060]; symbol=AT4G14200; hit=AT4G14200; species=arabidopsis; confidence=weak |
| Arabidopsis | AT4G14200 (AT4G14200)Pentatricopeptide repeat (PPR) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:827060] identity=43.2; qcov=0.122; evalue=5.66e-20; confidence=weak |
| Rice | Os08g0525700 (OJ1191_A10.120)- identity=56.2; qcov=0.031; evalue=9.65e-06; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992548 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057773205.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057773205.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057773205.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057773205.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057773205.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:11624303 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr7:11625698 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B36,B93 |
Chr7:11625897 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B69 |
Chr7:11625908 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B135,B8 |
Chr7:11625935 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C77 |
Chr7:11625981 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B73 |
Chr7:11626004 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A1 |
Chr7:11626188 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B69 |
Chr7:11626194 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr7:11626283 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A1 |
Chr7:11626463 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A1 |
Chr7:11626466 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B140,C5,D10,D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。