当前解析结果
SmilChr07G001597| 统一新 Gene ID | SmilChr07G001597 |
|---|---|
| 名称 | SmilChr07G001597 |
| 描述 | uncharacterized SmilChr07G001597 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 13304745 - 13306400 / - |
| NCBI Gene ID | LOC130995306 |
|---|---|
| GeneID | 130995306 |
| locus_tag | - |
| NCBI Name | LOC130995306 |
| 原始查询 | SmilChr07G001597 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DNA binding protein [Source:NCBI gene (formerly Entrezgene);Acc:820401]; symbol=AT3G12210; hit=AT3G12210; species=arabidopsis; confidence=high |
| 产物 | DNA binding protein [Source:NCBI gene (formerly Entrezgene);Acc:820401]; symbol=AT3G12210; hit=AT3G12210; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G12210 (AT3G12210)DNA binding protein [Source:NCBI gene (formerly Entrezgene);Acc:820401] identity=64; qcov=0.991; evalue=5.47e-87; confidence=high |
| Rice | Os03g0728600- identity=57.5; qcov=0.343; evalue=2.31e-19; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130995306 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057776527.1 |
| 2 | Nucleolus | 核仁 | 0.80000 | XP_057776527.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057776527.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057776527.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057776527.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:13305048 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr7:13305055 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A23,B15,B86,C10 |
Chr7:13305103 |
C |
T |
EMS_canonical_SNV | stop_gained | 3 | B91,C19,D5 |
Chr7:13305103 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B91,C19,D5 |
Chr7:13306226 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C6 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。