当前解析结果
SmilChr07G001720| 统一新 Gene ID | SmilChr07G001720 |
|---|---|
| 名称 | SmilChr07G001720 |
| 描述 | uncharacterized SmilChr07G001720 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 14620812 - 14623833 / - |
| NCBI Gene ID | LOC130995410 |
|---|---|
| GeneID | 130995410 |
| locus_tag | - |
| NCBI Name | LOC130995410 |
| 原始查询 | SmilChr07G001720 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Heat shock protein DnaJ with tetratricopeptide repeat-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:828142]; symbol=AT4G02100; hit=AT4G02100; species=arabidopsis; confidence=high |
| 产物 | Heat shock protein DnaJ with tetratricopeptide repeat-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:828142]; symbol=AT4G02100; hit=AT4G02100; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G02100 (AT4G02100)Heat shock protein DnaJ with tetratricopeptide repeat-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:828142] identity=62.7; qcov=1.04; evalue=0; confidence=high |
| Rice | Os03g0304500- identity=50.4; qcov=0.947; evalue=5.42e-151; confidence=high |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130995410 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.60000 | XP_057776664.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057776664.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057776664.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057776664.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057776664.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:14621079 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A18,A6,B61 |
Chr7:14621457 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B7 |
Chr7:14621510 |
G |
A |
EMS_canonical_SNV | stop_gained | 26 | A15,A16,A21,A5,B108,B121,B128,B136,B20,B23,B49,B56,B64,B65,B83,B96,C19,C37,C42,C48,C49,C62,C79,C8,C84,D3 |
Chr7:14621568 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A16,B106,B26,B53,C45 |
Chr7:14621588 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B103,B77,B78 |
Chr7:14621658 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B38,B39 |
Chr7:14621685 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A18,A6,B61 |
Chr7:14621739 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B130,B18,B23,B47,C54 |
Chr7:14621809 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C5 |
Chr7:14621823 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr7:14621911 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B111 |
Chr7:14622066 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A15,B4 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。