当前解析结果
SmilChr07G001744| 统一新 Gene ID | SmilChr07G001744 |
|---|---|
| 名称 | SmilChr07G001744 |
| 描述 | BAG family molecular chaperone regulator 8, chloroplastic-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 14801011 - 14804167 / - |
| NCBI Gene ID | LOC130993870 |
|---|---|
| GeneID | 130993870 |
| locus_tag | - |
| NCBI Name | LOC130993870 |
| 原始查询 | SmilChr07G001744 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | BAG family molecular chaperone regulator 8, chloroplastic-like |
| 产物 | BAG family molecular chaperone regulator 8%2C chloroplastic-like |
| Arabidopsis | AT3G29310 (AT3G29310)calmodulin-binding protein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:822589] identity=35.2; qcov=0.948; evalue=1.96e-17; confidence=low |
| Rice | Os05g0512400- identity=42.9; qcov=0.438; evalue=1.28e-12; confidence=low |
| GO | GO:0006457 (protein folding); GO:0009506 (plasmodesma); GO:0051087 (protein-folding chaperone binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993870 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057774889.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057774889.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057774889.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057774889.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057774889.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:14801051 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B132,B55,D6 |
Chr7:14801123 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A16,B26,C45 |
Chr7:14801130 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B60,C15,C35,C64,C66 |
Chr7:14801167 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr7:14801183 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A4,C20 |
Chr7:14801230 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B60,C15,C35,C64,C66 |
Chr7:14801232 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B12,B132,B55,C85,D6 |
Chr7:14801245 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C46,C83 |
Chr7:14801272 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B60,C15,C35,C64,C66 |
Chr7:14801276 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A13,B129,B7,D6,D7 |
Chr7:14801292 |
TCA |
T |
2bp_deletion | frameshift_variant | 1 | B48 |
Chr7:14801292 |
TCA |
T |
2bp_deletion | CDS_variant | 1 | B48 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。