当前解析结果
SmilChr07G001794| 统一新 Gene ID | SmilChr07G001794 |
|---|---|
| 名称 | SmilChr07G001794 |
| 描述 | protein NETWORKED 4A-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 15294363 - 15296856 / - |
| NCBI Gene ID | LOC130995482 |
|---|---|
| GeneID | 130995482 |
| locus_tag | - |
| NCBI Name | LOC130995482 |
| 原始查询 | SmilChr07G001794 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein NETWORKED 4A-like |
| 产物 | protein NETWORKED 4A-like |
| Arabidopsis | AT5G05180 (AT5G05180)myosin heavy chain, striated protein [Source:NCBI gene (formerly Entrezgene);Acc:830400] identity=27.7; qcov=0.902; evalue=1.23e-28; confidence=low |
| Rice | Os05g0168800- identity=33; qcov=0.715; evalue=6.9e-31; confidence=low |
| GO | GO:0005774 (vacuolar membrane) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130995482 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus membrane | 核膜 | 0.60000 | XP_057776761.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057776761.1 |
| 3 | Cytoplasm | 细胞质 | 0.20000 | XP_057776761.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057776761.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057776761.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:15294521 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C10 |
Chr7:15294533 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B73 |
Chr7:15294561 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B108,B131,B75,C16 |
Chr7:15294562 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B111,B99,C23,C8 |
Chr7:15294575 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | C32,C46,C68,C72,C83 |
Chr7:15294601 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C27,C71 |
Chr7:15294747 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | C32,C46,C68,C72,C83 |
Chr7:15294798 |
GAT |
G |
2bp_deletion | frameshift_variant | 57 | A16,A2,A3,A5,B106,B112,B114,B120,B15,B23,B33,B40,B46,B48,B52,B53,B64,B65,B71,B75,B76,B78,B8,B81,B87,B88,B89,B91,B95,B97,B99,C15,C18,C24,C25,C34,C35,C37,C4,C40,C42,C46,C47,C48,C57,C60,C63,C64,C66,C67,C72,C8,C84,C86,D7,D8,D9 |
Chr7:15294916 |
G |
GTA |
2bp_insertion | frameshift_variant | 2 | C18,C22 |
Chr7:15294916 |
G |
GTA |
2bp_insertion | CDS_variant | 2 | C18,C22 |
Chr7:15295002 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr7:15295203 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B1,C2 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。