当前解析结果
SmilChr07G001834| 统一新 Gene ID | SmilChr07G001834 |
|---|---|
| 名称 | SmilChr07G001834 |
| 描述 | NDR1/HIN1-like protein 6 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 15814227 - 15815452 / + |
| NCBI Gene ID | LOC130995520 |
|---|---|
| GeneID | 130995520 |
| locus_tag | - |
| NCBI Name | LOC130995520 |
| 原始查询 | SmilChr07G001834 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | NDR1/HIN1-like protein 6 |
| 产物 | NDR1/HIN1-like protein 6 |
| Arabidopsis | AT3G26350 (AT3G26350)proline-rich receptor-like kinase [Source:NCBI gene (formerly Entrezgene);Acc:822239] identity=53.4; qcov=0.575; evalue=3.3e-66; confidence=medium |
| Rice | Os08g0494000- identity=39.9; qcov=0.544; evalue=8.31e-44; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130995520 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057776816.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057776816.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057776816.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057776816.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057776816.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:15814267 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D3 |
Chr7:15814273 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr7:15814274 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B42,B43,C76 |
Chr7:15814307 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | B70 |
Chr7:15814307 |
AC |
A |
1bp_deletion | CDS_variant | 1 | B70 |
Chr7:15814327 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A5,C12,C48 |
Chr7:15814435 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A18 |
Chr7:15814543 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr7:15814607 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A23,B121,B128,C33,C48 |
Chr7:15814660 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B60 |
Chr7:15814693 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | B121 |
Chr7:15814693 |
AC |
A |
1bp_deletion | CDS_variant | 1 | B121 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。