当前解析结果
SmilChr07G002043| 统一新 Gene ID | SmilChr07G002043 |
|---|---|
| 名称 | SmilChr07G002043 |
| 描述 | uncharacterized SmilChr07G002043 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 18525935 - 18527535 / + |
| NCBI Gene ID | LOC130993125 |
|---|---|
| GeneID | 130993125 |
| locus_tag | - |
| NCBI Name | LOC130993125 |
| 原始查询 | SmilChr07G002043 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os10g0466100; species=rice; confidence=high |
| 产物 | hit=Os10g0466100; species=rice; confidence=high |
| Arabidopsis | AT3G23255 (AT3G23255)tRNA dimethylallyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:5008023] identity=54.9; qcov=1; evalue=7.78e-83; confidence=high |
| Rice | Os10g0466100- identity=53.5; qcov=0.983; evalue=1.2e-84; confidence=high |
| GO | GO:0000724 (double-strand break repair via homologous recombination); GO:0003697 (single-stranded DNA binding); GO:0097196 (Shu complex) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993125 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057773870.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057773870.1 |
| 3 | Nucleoplasm | 核质 | 0.40000 | XP_057773870.1 |
| 4 | Chromosome | 染色体 | 0.20000 | XP_057773870.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057773870.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:18526394 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A25,B66 |
Chr7:18526418 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A25,B66 |
Chr7:18526669 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A16,B81,C45 |
Chr7:18527086 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A5,B8,C58 |
Chr7:18527230 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B12,B55 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。