当前解析结果
SmilChr07G002140| 统一新 Gene ID | SmilChr07G002140 |
|---|---|
| 名称 | SmilChr07G002140 |
| 描述 | putative pentatricopeptide repeat-containing protein At2g02150 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 19563027 - 19567920 / + |
| NCBI Gene ID | LOC130993220 |
|---|---|
| GeneID | 130993220 |
| locus_tag | - |
| NCBI Name | LOC130993220 |
| 原始查询 | SmilChr07G002140 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | putative pentatricopeptide repeat-containing protein At2g02150 |
| 产物 | putative pentatricopeptide repeat-containing protein At2g02150 |
| Arabidopsis | AT2G02150 (EMB2794)Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:814746] identity=49; qcov=0.865; evalue=0; confidence=high |
| Rice | Os06g0565000- identity=37.1; qcov=0.782; evalue=1.58e-118; confidence=medium |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | PF01535 (PPR); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3); PF17177 (PPR_long); PF23276 (TPR_24) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993220 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 0.80000 | XP_057774013.1 |
| 2 | Chloroplast | 叶绿体 | 0.20000 | XP_057774013.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057774013.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057774013.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057774013.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:19563155 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C48 |
Chr7:19563167 |
AC |
A |
1bp_deletion | frameshift_variant | 122 | A10,A14,A15,A19,A23,A3,A4,B10,B101,B103,B104,B106,B109,B11,B113,B118,B119,B12,B120,B123,B125,B127,B128,B129,B13,B130,B131,B132,B135,B137,B140,B15,B16,B17,B18,B19,B23,B24,B27,B29,B3,B32,B33,B36,B38,B39,B4,B40,B41,B44,B45,B46,B48,B49,B5,B51,B52,B54,B55,B56,B6,B60,B62,B63,B64,B65,B66,B67,B69,B71,B72,B73,B77,B79,B80,B83,B85,B86,B87,B9,B96,C1,C17,C22,C23,C24,C26,C28,C31,C32,C36,C37,C38,C41,C47,C49,C52,C53,C56,C61,C62,C64,C66,C67,C68,C7,C70,C72,C73,C74,C76,C78,C79,C8,C81,C82,C83,C85,D1,D2,D3,D4 |
Chr7:19563174 |
C |
CT |
1bp_insertion | frameshift_variant | 27 | A16,A4,A6,B100,B111,B117,B126,B17,B42,B43,B51,B54,B64,B80,B90,B92,B93,B97,C30,C37,C39,C6,C60,C63,C71,C87,D9 |
Chr7:19563222 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B123,C52,C7,C76 |
Chr7:19563240 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B100,B107 |
Chr7:19563962 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:19564096 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr7:19564333 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C23 |
Chr7:19564533 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B123,C52,C7,C76 |
Chr7:19564626 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A16 |
Chr7:19564787 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A16 |
Chr7:19564857 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B123,C52,C7,C76 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057774013.1PF13041
PPR_2 290-336 aa
PF13812
PPR_3 292-334 aa
PF17177
PPR_long 295-443 aa
PF13812
PPR_3 312-371 aa
PF12854
PPR_1 319-351 aa
PF13041
PPR_2 322-371 aa
PF01535
PPR 325-355 aa
PF17177
PPR_long 336-478 aa
PF13812
PPR_3 349-404 aa
PF12854
PPR_1 353-386 aa
PF13041
PPR_2 357-406 aa
PF01535
PPR 360-390 aa
PF13812
PPR_3 381-440 aa
PF12854
PPR_1 389-421 aa
PF13041
PPR_2 392-441 aa
PF01535
PPR 395-424 aa
PF13812
PPR_3 417-473 aa
PF12854
PPR_1 424-456 aa
PF13041
PPR_2 427-473 aa
PF01535
PPR 430-459 aa
PF17177
PPR_long 446-522 aa
PF13812
PPR_3 452-495 aa
PF12854
PPR_1 459-491 aa
PF01535
PPR 465-493 aa
PF13041
PPR_2 469-510 aa
PF17177
PPR_long 483-620 aa
PF23276
TPR_24 485-584 aa
PF13812
PPR_3 487-533 aa
PF12854
PPR_1 495-525 aa
PF13041
PPR_2 498-535 aa
PF01535
PPR 500-530 aa
PF13041
PPR_2 532-569 aa
PF01535
PPR 536-565 aa
PF13812
PPR_3 537-576 aa
PF01535
PPR 570-600 aa
PF13812
PPR_3 590-647 aa
PF12854
PPR_1 600-631 aa
PF13041
PPR_2 603-651 aa
PF01535
PPR 605-634 aa
PF12854
PPR_1 633-659 aa
PF01535
PPR 640-669 aa
PF13041
PPR_2 644-686 aa
PF13812
PPR_3 662-716 aa
PF23276
TPR_24 663-769 aa
PF12854
PPR_1 669-700 aa
PF13041
PPR_2 672-718 aa
PF01535
PPR 675-705 aa
PF13812
PPR_3 696-752 aa
PF12854
PPR_1 703-736 aa
PF13041
PPR_2 707-755 aa
PF01535
PPR 711-739 aa
PF17177
PPR_long 719-812 aa
PF13812
PPR_3 731-787 aa
PF12854
PPR_1 739-770 aa
PF13041
PPR_2 744-788 aa
PF01535
PPR 746-775 aa
PF13812
PPR_3 766-812 aa
PF01535
PPR 780-810 aa
XP_057774014.1PF13041
PPR_2 290-336 aa
PF13812
PPR_3 292-334 aa
PF13812
PPR_3 312-371 aa
PF12854
PPR_1 319-351 aa
PF13041
PPR_2 322-371 aa
PF01535
PPR 325-355 aa
PF17177
PPR_long 336-449 aa
PF13812
PPR_3 347-404 aa
PF12854
PPR_1 353-386 aa
PF13041
PPR_2 357-406 aa
PF01535
PPR 360-390 aa
PF13812
PPR_3 381-440 aa
PF12854
PPR_1 389-421 aa
PF13041
PPR_2 392-441 aa
PF01535
PPR 395-424 aa
PF13812
PPR_3 417-473 aa
PF12854
PPR_1 424-456 aa
PF13041
PPR_2 427-473 aa
PF01535
PPR 430-459 aa
PF17177
PPR_long 445-521 aa
PF13812
PPR_3 452-495 aa
PF12854
PPR_1 459-491 aa
PF01535
PPR 465-493 aa
PF13041
PPR_2 469-510 aa
PF23276
TPR_24 485-586 aa
PF13812
PPR_3 487-542 aa
PF12854
PPR_1 495-525 aa
PF13041
PPR_2 498-534 aa
PF01535
PPR 500-530 aa
PF13041
PPR_2 532-569 aa
PF01535
PPR 536-565 aa
PF13812
PPR_3 537-576 aa
PF13812
PPR_3 555-604 aa
PF01535
PPR 570-600 aa
PF17177
PPR_long 600-691 aa
PF13812
PPR_3 610-667 aa
PF12854
PPR_1 618-649 aa
PF01535
PPR 625-654 aa
PF13041
PPR_2 625-667 aa
PF13812
PPR_3 645-691 aa
PF01535
PPR 659-689 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 290 | 336 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 292 | 334 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF17177 |
PPR_long | Repeat | 295 | 443 | 2.4e-51 | 174.9 | Pentacotripeptide-repeat region of PRORP |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 312 | 371 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 319 | 351 | 4.6e-134 | 436.5 | PPR repeat |
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 322 | 371 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 325 | 355 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF17177 |
PPR_long | Repeat | 336 | 478 | 2.4e-51 | 174.9 | Pentacotripeptide-repeat region of PRORP |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 349 | 404 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 353 | 386 | 4.6e-134 | 436.5 | PPR repeat |
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 357 | 406 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 360 | 390 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 381 | 440 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 389 | 421 | 4.6e-134 | 436.5 | PPR repeat |
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 392 | 441 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 395 | 424 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 417 | 473 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 424 | 456 | 4.6e-134 | 436.5 | PPR repeat |
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 427 | 473 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 430 | 459 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF17177 |
PPR_long | Repeat | 446 | 522 | 2.4e-51 | 174.9 | Pentacotripeptide-repeat region of PRORP |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 452 | 495 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 459 | 491 | 4.6e-134 | 436.5 | PPR repeat |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 465 | 493 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 469 | 510 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF17177 |
PPR_long | Repeat | 483 | 620 | 2.4e-51 | 174.9 | Pentacotripeptide-repeat region of PRORP |
XP_057774013.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 485 | 584 | 7.3e-35 | 120.5 | Pentatricopeptide repeat-containing protein |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 487 | 533 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 495 | 525 | 4.6e-134 | 436.5 | PPR repeat |
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 498 | 535 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 500 | 530 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 532 | 569 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 536 | 565 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 537 | 576 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 570 | 600 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 590 | 647 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 600 | 631 | 4.6e-134 | 436.5 | PPR repeat |
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 603 | 651 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 605 | 634 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 633 | 659 | 4.6e-134 | 436.5 | PPR repeat |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 640 | 669 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 644 | 686 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 662 | 716 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 663 | 769 | 7.3e-35 | 120.5 | Pentatricopeptide repeat-containing protein |
XP_057774013.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 669 | 700 | 4.6e-134 | 436.5 | PPR repeat |
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 672 | 718 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 675 | 705 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 696 | 752 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 703 | 736 | 4.6e-134 | 436.5 | PPR repeat |
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 707 | 755 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 711 | 739 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF17177 |
PPR_long | Repeat | 719 | 812 | 2.4e-51 | 174.9 | Pentacotripeptide-repeat region of PRORP |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 731 | 787 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 739 | 770 | 4.6e-134 | 436.5 | PPR repeat |
XP_057774013.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 744 | 788 | 1.7e-171 | 557.0 | PPR repeat family |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 746 | 775 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774013.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 766 | 812 | 3.4e-91 | 300.0 | Pentatricopeptide repeat domain |
XP_057774013.1 |
Pfam | PF01535 |
PPR | Repeat | 780 | 810 | 1.6e-114 | 367.1 | PPR repeat |
XP_057774014.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 290 | 336 | 4.5e-129 | 421.2 | PPR repeat family |
XP_057774014.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 292 | 334 | 1e-77 | 256.8 | Pentatricopeptide repeat domain |
XP_057774014.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 312 | 371 | 1e-77 | 256.8 | Pentatricopeptide repeat domain |
XP_057774014.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 319 | 351 | 4.4e-96 | 315.0 | PPR repeat |
XP_057774014.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 322 | 371 | 4.5e-129 | 421.2 | PPR repeat family |
XP_057774014.1 |
Pfam | PF01535 |
PPR | Repeat | 325 | 355 | 1.4e-84 | 273.3 | PPR repeat |
XP_057774014.1 |
Pfam | PF17177 |
PPR_long | Repeat | 336 | 449 | 5.6e-38 | 131.2 | Pentacotripeptide-repeat region of PRORP |
XP_057774014.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 347 | 404 | 1e-77 | 256.8 | Pentatricopeptide repeat domain |
XP_057774014.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 353 | 386 | 4.4e-96 | 315.0 | PPR repeat |
XP_057774014.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 357 | 406 | 4.5e-129 | 421.2 | PPR repeat family |
XP_057774014.1 |
Pfam | PF01535 |
PPR | Repeat | 360 | 390 | 1.4e-84 | 273.3 | PPR repeat |
XP_057774014.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 381 | 440 | 1e-77 | 256.8 | Pentatricopeptide repeat domain |
XP_057774014.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 389 | 421 | 4.4e-96 | 315.0 | PPR repeat |
XP_057774014.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 392 | 441 | 4.5e-129 | 421.2 | PPR repeat family |
XP_057774014.1 |
Pfam | PF01535 |
PPR | Repeat | 395 | 424 | 1.4e-84 | 273.3 | PPR repeat |
XP_057774014.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 417 | 473 | 1e-77 | 256.8 | Pentatricopeptide repeat domain |
XP_057774014.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 424 | 456 | 4.4e-96 | 315.0 | PPR repeat |
XP_057774014.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 427 | 473 | 4.5e-129 | 421.2 | PPR repeat family |
XP_057774014.1 |
Pfam | PF01535 |
PPR | Repeat | 430 | 459 | 1.4e-84 | 273.3 | PPR repeat |
XP_057774014.1 |
Pfam | PF17177 |
PPR_long | Repeat | 445 | 521 | 5.6e-38 | 131.2 | Pentacotripeptide-repeat region of PRORP |
XP_057774014.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 452 | 495 | 1e-77 | 256.8 | Pentatricopeptide repeat domain |
XP_057774014.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 459 | 491 | 4.4e-96 | 315.0 | PPR repeat |
XP_057774014.1 |
Pfam | PF01535 |
PPR | Repeat | 465 | 493 | 1.4e-84 | 273.3 | PPR repeat |
XP_057774014.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 469 | 510 | 4.5e-129 | 421.2 | PPR repeat family |
XP_057774014.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 485 | 586 | 9.4e-26 | 91.0 | Pentatricopeptide repeat-containing protein |
XP_057774014.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 487 | 542 | 1e-77 | 256.8 | Pentatricopeptide repeat domain |
XP_057774014.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 495 | 525 | 4.4e-96 | 315.0 | PPR repeat |
XP_057774014.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 498 | 534 | 4.5e-129 | 421.2 | PPR repeat family |
XP_057774014.1 |
Pfam | PF01535 |
PPR | Repeat | 500 | 530 | 1.4e-84 | 273.3 | PPR repeat |
XP_057774014.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 532 | 569 | 4.5e-129 | 421.2 | PPR repeat family |
XP_057774014.1 |
Pfam | PF01535 |
PPR | Repeat | 536 | 565 | 1.4e-84 | 273.3 | PPR repeat |
XP_057774014.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 537 | 576 | 1e-77 | 256.8 | Pentatricopeptide repeat domain |
XP_057774014.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 555 | 604 | 1e-77 | 256.8 | Pentatricopeptide repeat domain |
XP_057774014.1 |
Pfam | PF01535 |
PPR | Repeat | 570 | 600 | 1.4e-84 | 273.3 | PPR repeat |
XP_057774014.1 |
Pfam | PF17177 |
PPR_long | Repeat | 600 | 691 | 5.6e-38 | 131.2 | Pentacotripeptide-repeat region of PRORP |
XP_057774014.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 610 | 667 | 1e-77 | 256.8 | Pentatricopeptide repeat domain |
XP_057774014.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 618 | 649 | 4.4e-96 | 315.0 | PPR repeat |
XP_057774014.1 |
Pfam | PF01535 |
PPR | Repeat | 625 | 654 | 1.4e-84 | 273.3 | PPR repeat |
XP_057774014.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 625 | 667 | 4.5e-129 | 421.2 | PPR repeat family |
XP_057774014.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 645 | 691 | 1e-77 | 256.8 | Pentatricopeptide repeat domain |
XP_057774014.1 |
Pfam | PF01535 |
PPR | Repeat | 659 | 689 | 1.4e-84 | 273.3 | PPR repeat |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。