当前解析结果
SmilChr07G002234| 统一新 Gene ID | SmilChr07G002234 |
|---|---|
| 名称 | SmilChr07G002234 |
| 描述 | uncharacterized SmilChr07G002234 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 20540975 - 20543553 / - |
| NCBI Gene ID | LOC130993316 |
|---|---|
| GeneID | 130993316 |
| locus_tag | - |
| NCBI Name | LOC130993316 |
| 原始查询 | SmilChr07G002234 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | fantom protein [Source:NCBI gene (formerly Entrezgene);Acc:832521]; symbol=AT5G24500; hit=AT5G24500; species=arabidopsis; confidence=low |
| 产物 | fantom protein [Source:NCBI gene (formerly Entrezgene);Acc:832521]; symbol=AT5G24500; hit=AT5G24500; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G24500 (AT5G24500)fantom protein [Source:NCBI gene (formerly Entrezgene);Acc:832521] identity=33.5; qcov=0.804; evalue=4.11e-21; confidence=low |
| Rice | Os06g0316100- identity=32.5; qcov=0.502; evalue=3.08e-08; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993316 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057774132.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057774132.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057774132.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057774132.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057774132.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:20542803 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C63,C87 |
Chr7:20542889 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A13 |
Chr7:20542942 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr7:20542972 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr7:20543071 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr7:20543080 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr7:20543197 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:20543297 |
ACG |
A |
2bp_deletion | frameshift_variant | 1 | B7 |
Chr7:20543297 |
ACG |
A |
2bp_deletion | CDS_variant | 1 | B7 |
Chr7:20543334 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B43 |
Chr7:20543401 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:20543427 |
AT |
A |
1bp_deletion | frameshift_variant | 14 | A19,A20,B115,B118,B14,B28,B53,B65,C11,C12,C54,C69,C75,D8 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。