当前解析结果
SmilChr07G002348| 统一新 Gene ID | SmilChr07G002348 |
|---|---|
| 名称 | SmilChr07G002348 |
| 描述 | uncharacterized SmilChr07G002348 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 21808970 - 21810924 / + |
| NCBI Gene ID | LOC130993426 |
|---|---|
| GeneID | 130993426 |
| locus_tag | - |
| NCBI Name | LOC130993426 |
| 原始查询 | SmilChr07G002348 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | PRLI-interacting factor [Source:NCBI gene (formerly Entrezgene);Acc:832112]; symbol=AT5G19900; hit=AT5G19900; species=arabidopsis; confidence=high |
| 产物 | PRLI-interacting factor [Source:NCBI gene (formerly Entrezgene);Acc:832112]; symbol=AT5G19900; hit=AT5G19900; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G19900 (AT5G19900)PRLI-interacting factor [Source:NCBI gene (formerly Entrezgene);Acc:832112] identity=57.2; qcov=0.779; evalue=4.15e-98; confidence=high |
| Rice | Os02g0832600- identity=55.2; qcov=0.536; evalue=1.58e-67; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993426 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057774290.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057774290.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057774290.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057774290.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057774290.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:21809435 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:21809631 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B111,B72,C58 |
Chr7:21809749 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B13,B82,C2,D2 |
Chr7:21809870 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr7:21809972 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B106,C14,C65,D11 |
Chr7:21810071 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B8 |
Chr7:21810257 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr7:21810416 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B124,B42,B43,B76 |
Chr7:21810467 |
T |
TGA |
2bp_insertion | frameshift_variant | 1 | C66 |
Chr7:21810467 |
T |
TGA |
2bp_insertion | CDS_variant | 1 | C66 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。