Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G002391`

染色体: Chr07 坐标: 22286901-22292554 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G002391`
名称	SmilChr07G002391
描述	uncharacterized SmilChr07G002391
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	22286901 - 22292554 / `-`

ID 对照

NCBI Gene ID	`LOC130993473`
GeneID	`130993473`
locus_tag	`-`
NCBI Name	`LOC130993473`
原始查询	`SmilChr07G002391`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	GPI-anchored adhesin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:832454]; symbol=AT5G23890; hit=AT5G23890; species=arabidopsis; confidence=high
产物	GPI-anchored adhesin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:832454]; symbol=AT5G23890; hit=AT5G23890; species=arabidopsis; confidence=high
Arabidopsis	`AT5G23890` (AT5G23890) GPI-anchored adhesin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:832454] identity=60.4; qcov=0.806; evalue=0; confidence=high
Rice	`Os03g0862100` - identity=59.5; qcov=0.756; evalue=0; confidence=high
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130993473

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057774350.1`
2	Chloroplast membrane	叶绿体膜	1.00000	`XP_057774350.1`
3	Chloroplast thylakoid	类囊体	0.40000	`XP_057774352.1`
4	Nucleus	细胞核	0.00000	`XP_057774350.1`
5	Chromosome	染色体	0.00000	`XP_057774350.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:22287208`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B78
`Chr7:22287235`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr7:22287269`	`C`	`CT`	1bp_insertion	frameshift_variant	3	A21,B115,B50
`Chr7:22287269`	`C`	`CT`	1bp_insertion	CDS_variant	3	A21,B115,B50
`Chr7:22287284`	`T`	`TA`	1bp_insertion	frameshift_variant	1	B50
`Chr7:22287284`	`T`	`TA`	1bp_insertion	CDS_variant	1	B50
`Chr7:22287288`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B53,C14,C44,C48
`Chr7:22287307`	`C`	`T`	EMS_canonical_SNV	stop_gained	3	B140,B73,C78
`Chr7:22287307`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B140,B73,C78
`Chr7:22287323`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B33,B36,B37,B90,B94
`Chr7:22287386`	`AT`	`A`	1bp_deletion	frameshift_variant	12	A20,A23,A25,A3,A5,B140,B73,B79,B91,C16,C57,C77
`Chr7:22287407`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A24,A5,A7,B15,B60

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057918367.1
ATAACATATTATCCATATTTAAATAAGAAATCTGAACCCTAGATATTGATTTTTATAAATTTAAAGTAGGAAACGATTTTGTTAGGACAATGAGATTTTAAGTTAACCGAATTACCCGGTTCGGTAGTTCCGTTGATATTTGAAACTCGTATTTTGCGGTTCGTCGGATAAGATGGATAATAATAATACACAAATGGAAACCAAATAGGTTGTTCACAAAACCCTAACGCAACTCGGAAAAAATTATCCATAAAATCTCC...

XM_057918369.1
ACAATGAGATTTTAAGTTAACCGAATTACCCGGTTCGGTAGTTCCGTTGATATTTGAAACTCGTATTTTGCGGTTCGTCGGATAAGATGGATAATAATAATACACAAATGGAAACCAAATAGGTTGTTCACAAAACCCTAACGCAACTCGGAAAAAATTATCCATAAAATCTCCTAAATGCAAACCCGAATGATAACAATCCTGAGCTGCATCCCCAAGTAGTTGCTACGTTTCGCGGAGGCGTATATTTCAAAAGAAAT...

CDS

3 records

下载 CDS FASTA

LOC130993473
ATGAACGCTGTGACCACGACGGCGTTCTGTCCGACGTCGTTTCAGCTTAAATTCGCACTCGCTGGCCGGAAACCTAAGTTGGCGTTTGTGCAGACTCGCCTGCCGAAGATCGATCGCCGCAGCGTGGAACTCGCGTCAGTGGTTGTACGGAGTAGCGCGGTCAATGGTAACGGCGTGGAGCGACGTAGTCCGGGCAATTCATCATGGACGAACTTGAATTCTGCGGCTGATGATTTCTCTGGCTGGGCGAACGGTGACGC...

Protein

3 records

下载 Protein FASTA

XP_057774350.1
MNAVTTTAFCPTSFQLKFALAGRKPKLAFVQTRLPKIDRRSVELASVVVRSSAVNGNGVERRSPGNSSWTNLNSAADDFSGWANGDAERHSGDPKPKKSVVGILAAGAAGIVLVAGITFAAFSMSRRSTSRVGEQMEPLTTEQEESLLFDDKQNQVEGDKNGKEVEMLDSNTAESMTGKDGDPLSINENTEAIESRVSDDTGLRQSSEEGEGSFPIGVKESAISNNMVSPEATDKHPIHDTYGDSSPMQSIQSNNDTIAS...

XP_057774351.1
MNAVTTTAFCPTSFQLKFALAGRKPKLAFVQTRLPKIDRRSVELASVVVRSSAVNGNGVERRSPGNSSWTNLNSAADDFSGWANGDAERHSGDPKPKKSVVGILAAGAAGIVLVAGITFAAFSMSRRSTSRVGEQMEPLTTEQEESLLFDDKQNQVEGDKNGKEVEMLDSNTAESMTGKDGDPLSINENTEAIESRVSDDTGLRQSSEEGEGSFPIGVKESAISNNMVSPEATDKHPIHDTYGDSSPMQSIQSNNDTIAS...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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