当前解析结果
SmilChr07G002420| 统一新 Gene ID | SmilChr07G002420 |
|---|---|
| 名称 | SmilChr07G002420 |
| 描述 | uncharacterized SmilChr07G002420 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 22537571 - 22538300 / + |
| NCBI Gene ID | LOC130993503 |
|---|---|
| GeneID | 130993503 |
| locus_tag | - |
| NCBI Name | LOC130993503 |
| 原始查询 | SmilChr07G002420 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Sugar isomerase (SIS) family protein [Source:NCBI gene (formerly Entrezgene);Acc:835295]; symbol=AT5G52190; hit=AT5G52190; species=arabidopsis; confidence=high |
| 产物 | Sugar isomerase (SIS) family protein [Source:NCBI gene (formerly Entrezgene);Acc:835295]; symbol=AT5G52190; hit=AT5G52190; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G52190 (AT5G52190)Sugar isomerase (SIS) family protein [Source:NCBI gene (formerly Entrezgene);Acc:835295] identity=57.7; qcov=1.06; evalue=3.15e-78; confidence=high |
| Rice | Os04g0568600- identity=67.7; qcov=0.806; evalue=6.19e-69; confidence=high |
| GO | GO:0016853 (isomerase activity); GO:0097367 (carbohydrate derivative binding); GO:1901135 (carbohydrate derivative metabolic process) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993503 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057774392.1 |
| 2 | Cytosol | 细胞质基质 | 0.80000 | XP_057774392.1 |
| 3 | Nucleus | 细胞核 | 0.40000 | XP_057774392.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057774392.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057774392.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:22537580 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A21,B115,B20,C48 |
Chr7:22537666 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B21,B51,B85,C27,C44 |
Chr7:22537714 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B129,B19 |
Chr7:22537875 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D8 |
Chr7:22538126 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C39 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。