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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr07G002431

染色体: Chr07 坐标: 22629172-22632944 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr07G002431
名称SmilChr07G002431
描述E3 ubiquitin ligase BIG BROTHER-related-like
染色体 / SeqIDChr07 / NC_080393.1
坐标与链方向22629172 - 22632944 / +

ID 对照

NCBI Gene IDLOC130993513
GeneID130993513
locus_tag-
NCBI NameLOC130993513
原始查询SmilChr07G002431

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述E3 ubiquitin ligase BIG BROTHER-related-like
产物E3 ubiquitin ligase BIG BROTHER-related-like
ArabidopsisAT3G63530 (BB)
RING/U-box superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:825528]
identity=56.1; qcov=0.43; evalue=4.23e-34; confidence=low
RiceOs04g0571200 (OsRFPH2-14)
-
identity=39.9; qcov=0.996; evalue=3.98e-44; confidence=medium
GOGO:0004842 (ubiquitin-protein transferase activity); GO:0016567 (protein ubiquitination); GO:0031624 (ubiquitin conjugating enzyme binding); GO:0046621 (negative regulation of organ growth)
KEGG-
PfamPF00097 (zf-C3HC4); PF12678 (zf-rbx1); PF13639 (zf-RING_2); PF13920 (zf-C3HC4_3); PF13923 (zf-C3HC4_2); PF17123 (zf-RING_11)
InterPro-
eggNOG-
NRGeneID:130993513

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Cytosol 细胞质基质 1.00000 XP_057774403.1
2 Cytoplasm 细胞质 1.00000 XP_057774415.1
3 Nucleus 细胞核 0.40000 XP_057774403.1
4 Chromosome 染色体 0.00000 XP_057774403.1
5 Centromere 着丝粒 0.00000 XP_057774403.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr7:22630985 G A EMS_canonical_SNV CDS_variant 1 B22
Chr7:22631814 G A EMS_canonical_SNV CDS_variant 3 B64,C19,C31

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057774403.1
252 aa
N
1
126
252
zf-RING_11
zf-RING_2
zf-C3HC4
C
PF17123 zf-RING_11 201-229 aa PF13639 zf-RING_2 201-237 aa PF00097 zf-C3HC4 202-238 aa
XP_057774404.1
252 aa
N
1
126
252
zf-RING_11
zf-RING_2
zf-C3HC4
C
PF17123 zf-RING_11 201-229 aa PF13639 zf-RING_2 201-237 aa PF00097 zf-C3HC4 202-238 aa
XP_057774405.1
252 aa
N
1
126
252
zf-RING_11
zf-RING_2
zf-C3HC4
C
PF17123 zf-RING_11 201-229 aa PF13639 zf-RING_2 201-237 aa PF00097 zf-C3HC4 202-238 aa
XP_057774406.1
252 aa
N
1
126
252
zf-RING_11
zf-RING_2
zf-C3HC4
C
PF17123 zf-RING_11 201-229 aa PF13639 zf-RING_2 201-237 aa PF00097 zf-C3HC4 202-238 aa
XP_057774407.1
252 aa
N
1
126
252
zf-RING_11
zf-RING_2
zf-C3HC4
C
PF17123 zf-RING_11 201-229 aa PF13639 zf-RING_2 201-237 aa PF00097 zf-C3HC4 202-238 aa
XP_057774408.1
252 aa
N
1
126
252
zf-RING_11
zf-RING_2
zf-C3HC4
C
PF17123 zf-RING_11 201-229 aa PF13639 zf-RING_2 201-237 aa PF00097 zf-C3HC4 202-238 aa
XP_057774409.1
252 aa
N
1
126
252
zf-RING_11
zf-RING_2
zf-C3HC4
C
PF17123 zf-RING_11 201-229 aa PF13639 zf-RING_2 201-237 aa PF00097 zf-C3HC4 202-238 aa
XP_057774410.1
252 aa
N
1
126
252
zf-RING_11
zf-RING_2
zf-C3HC4
C
PF17123 zf-RING_11 201-229 aa PF13639 zf-RING_2 201-237 aa PF00097 zf-C3HC4 202-238 aa
XP_057774411.1
252 aa
N
1
126
252
zf-RING_11
zf-RING_2
zf-C3HC4
C
PF17123 zf-RING_11 201-229 aa PF13639 zf-RING_2 201-237 aa PF00097 zf-C3HC4 202-238 aa
XP_057774412.1
252 aa
N
1
126
252
zf-RING_11
zf-RING_2
zf-C3HC4
C
PF17123 zf-RING_11 201-229 aa PF13639 zf-RING_2 201-237 aa PF00097 zf-C3HC4 202-238 aa
XP_057774413.1
252 aa
N
1
126
252
zf-RING_11
zf-RING_2
zf-C3HC4
C
PF17123 zf-RING_11 201-229 aa PF13639 zf-RING_2 201-237 aa PF00097 zf-C3HC4 202-238 aa
XP_057774414.1
252 aa
N
1
126
252
zf-RING_11
zf-RING_2
zf-C3HC4
C
PF17123 zf-RING_11 201-229 aa PF13639 zf-RING_2 201-237 aa PF00097 zf-C3HC4 202-238 aa
XP_057774415.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
XP_057774416.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
XP_057774417.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
XP_057774418.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
XP_057774419.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
XP_057774420.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
XP_057774421.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
XP_057774422.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
XP_057774423.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
XP_057774425.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
XP_057774426.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
XP_057774427.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
XP_057774428.1
249 aa
N
1
124
249
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_2
zf-C3HC4
C
PF12678 zf-rbx1 197-243 aa PF13920 zf-C3HC4_3 199-248 aa PF17123 zf-RING_11 201-229 aa PF13923 zf-C3HC4_2 201-242 aa PF13639 zf-RING_2 201-243 aa PF00097 zf-C3HC4 202-242 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057774403.1 Pfam PF17123 zf-RING_11 Domain 201 229 1e-07 32.2 RING-like zinc finger
XP_057774403.1 Pfam PF13639 zf-RING_2 Domain 201 237 1.4e-10 42.0 Ring finger domain
XP_057774403.1 Pfam PF00097 zf-C3HC4 Domain 202 238 2.7e-06 27.8 Zinc finger, C3HC4 type (RING finger)
XP_057774404.1 Pfam PF17123 zf-RING_11 Domain 201 229 1e-07 32.2 RING-like zinc finger
XP_057774404.1 Pfam PF13639 zf-RING_2 Domain 201 237 1.4e-10 42.0 Ring finger domain
XP_057774404.1 Pfam PF00097 zf-C3HC4 Domain 202 238 2.7e-06 27.8 Zinc finger, C3HC4 type (RING finger)
XP_057774405.1 Pfam PF17123 zf-RING_11 Domain 201 229 1e-07 32.2 RING-like zinc finger
XP_057774405.1 Pfam PF13639 zf-RING_2 Domain 201 237 1.4e-10 42.0 Ring finger domain
XP_057774405.1 Pfam PF00097 zf-C3HC4 Domain 202 238 2.7e-06 27.8 Zinc finger, C3HC4 type (RING finger)
XP_057774406.1 Pfam PF17123 zf-RING_11 Domain 201 229 1e-07 32.2 RING-like zinc finger
XP_057774406.1 Pfam PF13639 zf-RING_2 Domain 201 237 1.4e-10 42.0 Ring finger domain
XP_057774406.1 Pfam PF00097 zf-C3HC4 Domain 202 238 2.7e-06 27.8 Zinc finger, C3HC4 type (RING finger)
XP_057774407.1 Pfam PF17123 zf-RING_11 Domain 201 229 1e-07 32.2 RING-like zinc finger
XP_057774407.1 Pfam PF13639 zf-RING_2 Domain 201 237 1.4e-10 42.0 Ring finger domain
XP_057774407.1 Pfam PF00097 zf-C3HC4 Domain 202 238 2.7e-06 27.8 Zinc finger, C3HC4 type (RING finger)
XP_057774408.1 Pfam PF17123 zf-RING_11 Domain 201 229 1e-07 32.2 RING-like zinc finger
XP_057774408.1 Pfam PF13639 zf-RING_2 Domain 201 237 1.4e-10 42.0 Ring finger domain
XP_057774408.1 Pfam PF00097 zf-C3HC4 Domain 202 238 2.7e-06 27.8 Zinc finger, C3HC4 type (RING finger)
XP_057774409.1 Pfam PF17123 zf-RING_11 Domain 201 229 1e-07 32.2 RING-like zinc finger
XP_057774409.1 Pfam PF13639 zf-RING_2 Domain 201 237 1.4e-10 42.0 Ring finger domain
XP_057774409.1 Pfam PF00097 zf-C3HC4 Domain 202 238 2.7e-06 27.8 Zinc finger, C3HC4 type (RING finger)
XP_057774410.1 Pfam PF17123 zf-RING_11 Domain 201 229 1e-07 32.2 RING-like zinc finger
XP_057774410.1 Pfam PF13639 zf-RING_2 Domain 201 237 1.4e-10 42.0 Ring finger domain
XP_057774410.1 Pfam PF00097 zf-C3HC4 Domain 202 238 2.7e-06 27.8 Zinc finger, C3HC4 type (RING finger)
XP_057774411.1 Pfam PF17123 zf-RING_11 Domain 201 229 1e-07 32.2 RING-like zinc finger
XP_057774411.1 Pfam PF13639 zf-RING_2 Domain 201 237 1.4e-10 42.0 Ring finger domain
XP_057774411.1 Pfam PF00097 zf-C3HC4 Domain 202 238 2.7e-06 27.8 Zinc finger, C3HC4 type (RING finger)
XP_057774412.1 Pfam PF17123 zf-RING_11 Domain 201 229 1e-07 32.2 RING-like zinc finger
XP_057774412.1 Pfam PF13639 zf-RING_2 Domain 201 237 1.4e-10 42.0 Ring finger domain
XP_057774412.1 Pfam PF00097 zf-C3HC4 Domain 202 238 2.7e-06 27.8 Zinc finger, C3HC4 type (RING finger)
XP_057774413.1 Pfam PF17123 zf-RING_11 Domain 201 229 1e-07 32.2 RING-like zinc finger
XP_057774413.1 Pfam PF13639 zf-RING_2 Domain 201 237 1.4e-10 42.0 Ring finger domain
XP_057774413.1 Pfam PF00097 zf-C3HC4 Domain 202 238 2.7e-06 27.8 Zinc finger, C3HC4 type (RING finger)
XP_057774414.1 Pfam PF17123 zf-RING_11 Domain 201 229 1e-07 32.2 RING-like zinc finger
XP_057774414.1 Pfam PF13639 zf-RING_2 Domain 201 237 1.4e-10 42.0 Ring finger domain
XP_057774414.1 Pfam PF00097 zf-C3HC4 Domain 202 238 2.7e-06 27.8 Zinc finger, C3HC4 type (RING finger)
XP_057774415.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774415.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774415.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774415.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774415.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774415.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)
XP_057774416.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774416.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774416.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774416.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774416.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774416.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)
XP_057774417.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774417.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774417.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774417.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774417.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774417.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)
XP_057774418.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774418.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774418.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774418.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774418.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774418.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)
XP_057774419.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774419.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774419.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774419.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774419.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774419.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)
XP_057774420.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774420.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774420.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774420.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774420.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774420.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)
XP_057774421.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774421.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774421.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774421.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774421.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774421.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)
XP_057774422.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774422.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774422.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774422.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774422.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774422.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)
XP_057774423.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774423.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774423.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774423.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774423.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774423.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)
XP_057774425.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774425.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774425.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774425.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774425.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774425.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)
XP_057774426.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774426.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774426.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774426.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774426.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774426.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)
XP_057774427.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774427.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774427.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774427.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774427.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774427.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)
XP_057774428.1 Pfam PF12678 zf-rbx1 Domain 197 243 2.3e-08 34.9 RING-H2 zinc finger domain
XP_057774428.1 Pfam PF13920 zf-C3HC4_3 Domain 199 248 9.3e-07 29.3 Zinc finger, C3HC4 type (RING finger)
XP_057774428.1 Pfam PF17123 zf-RING_11 Domain 201 229 1.3e-07 31.9 RING-like zinc finger
XP_057774428.1 Pfam PF13923 zf-C3HC4_2 Domain 201 242 2e-09 37.8 Zinc finger, C3HC4 type (RING finger)
XP_057774428.1 Pfam PF13639 zf-RING_2 Domain 201 243 6.5e-14 52.6 Ring finger domain
XP_057774428.1 Pfam PF00097 zf-C3HC4 Domain 202 242 8.3e-08 32.7 Zinc finger, C3HC4 type (RING finger)

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

25 records

下载 cDNA FASTA
XM_057918437.1
GTCAACATTCTTTATTAGTAATTTGCAACAAGAAAGATTAGATGCCATTAGCAGAGCAGCTGAATGCAGTCGGCCGCAATTCTTTTATCAAGACAATGTCAAGTGGGACCCAAATTTTTCTTACTTTCCCACCAGCTTCCACATATAAAAACGTCTCCTTTTTTTATATTTGTTCGGTTATGCATTTTACTTCACTGTTTTTACTTCAGTGTGTGAGTTGGAGGAATGGGGACTTTGGAGTGAGGAAATAAAGTGAGAGA...
XM_057918432.1
AACATTCTTTATTAGTAATTTGCAACAAGAAAGATTAGATGCCATTAGCAGAGCAGCTGAATGCAGTCGGCCGCAATTCTTTTATCAAGACAATGTCAAGTGGGACCCAAATTTTTCTTACTTTCCCACCAGCTTCCACATATAAAAACGTCTCCTTTTTTTATATTTGTTCGGTTATGCATTTTACTTCACTGTTTTTACTTCAGTGTGTGAGTTGGAGGAATGGGGACTTTGGAGTGAGGAAATAAAGTGAGAGAAGG...

CDS

25 records

下载 CDS FASTA
LOC130993513
ATGATGGCTGAAGCACCGGTAATGGACAATGAGGTCTTTAATCATTATTTGACTAGTATGACGCCAGCTGAAATTGCTGAACATCTCAAGGACAGTTGCCCAGAATTTGGTGATCTAAATGTTGAAGAACTTCTCTTAGTGCAGGAAAGTGCCTTTCAATTCATTCAGAACAAAAATCAGAACAAGGATACAGCCTCCAGCTATGGTGAAACTACTGACGACAGTTTGGTTCTGGAGCATGAGAATGAACTATCGCATGG...
LOC130993513
ATGATGGCTGAAGCACCGGTAATGGACAATGAGGTCTTTAATCATTATTTGACTAGTATGACGCCAGCTGAAATTGCTGAACATCTCAAGGACAGTTGCCCAGAATTTGGTGATCTAAATGTTGAAGAACTTCTCTTAGTGCAGGAAAGTGCCTTTCAATTCATTCAGAACAAAAATCAGAACAAGGATACAGCCTCCAGCTATGGTGAAACTACTGACGACAGTTTGGTTCTGGAGCATGAGAATGAACTATCGCATGG...

Protein

25 records

下载 Protein FASTA
XP_057774403.1
MMAEAPVMDNEVFNHYLTSMTPAEIAEHLKDSCPEFGDLNVEELLLVQESAFQFIQNKNQNKDTASSYGETTDDSLVLEHENELSHGGSIEHQLALDEALARALELGDDFNCLSVNEDAVSAVDNTRSTVRATPSRVGSQNTRQDDIDPDTMTYEELQSLGESVGSESRGLTEDFISRLPTFRYKSNKSGLFSKKKKETEECVICCDGYKHGAKVITLPCAHHYHSNCITTWLQQNKVKGLEMKYYLMVIEK
XP_057774404.1
MMAEAPVMDNEVFNHYLTSMTPAEIAEHLKDSCPEFGDLNVEELLLVQESAFQFIQNKNQNKDTASSYGETTDDSLVLEHENELSHGGSIEHQLALDEALARALELGDDFNCLSVNEDAVSAVDNTRSTVRATPSRVGSQNTRQDDIDPDTMTYEELQSLGESVGSESRGLTEDFISRLPTFRYKSNKSGLFSKKKKETEECVICCDGYKHGAKVITLPCAHHYHSNCITTWLQQNKVKGLEMKYYLMVIEK

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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