Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G002494`

染色体: Chr07 坐标: 23618481-23622145 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G002494`
名称	SmilChr07G002494
描述	beta-fructofuranosidase, soluble isoenzyme I-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	23618481 - 23622145 / `-`

ID 对照

NCBI Gene ID	`LOC130993574`
GeneID	`130993574`
locus_tag	`-`
NCBI Name	`LOC130993574`
原始查询	`SmilChr07G002494`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	beta-fructofuranosidase, soluble isoenzyme I-like
产物	beta-fructofuranosidase%2C soluble isoenzyme I-like
Arabidopsis	`AT1G62660` (AT1G62660) Glycosyl hydrolases family 32 protein [Source:NCBI gene (formerly Entrezgene);Acc:842563] identity=59.8; qcov=0.984; evalue=0; confidence=high
Rice	`Os04g0535600` (OSINV2) - identity=59.2; qcov=1.02; evalue=0; confidence=high
GO	GO:0004564 (beta-fructofuranosidase activity); GO:0005975 (carbohydrate metabolic process)
KEGG	smil00052 (Galactose metabolism - Salvia miltiorrhiza (redroot sage)); smil00500 (Starch and sucrose metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage))
Pfam	PF00251 (Glyco_hydro_32N); PF08244 (Glyco_hydro_32C); PF11837 (INV_N)
InterPro	-
eggNOG	-
NR	GeneID:130993574

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole	液泡	0.80000	`XP_057774484.1`
2	Golgi apparatus	高尔基体	0.40000	`XP_057774484.1`
3	Vacuole membrane	液泡膜	0.40000	`XP_057774484.1`
4	Endoplasmic reticulum	内质网	0.20000	`XP_057774485.1`
5	Nucleus	细胞核	0.00000	`XP_057774484.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:23618810`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B136,C30,C57,C86,D9
`Chr7:23619482`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B9,C35,D6
`Chr7:23619553`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B132
`Chr7:23619699`	`C`	`T`	EMS_canonical_SNV	stop_gained	1	B108
`Chr7:23619699`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B108
`Chr7:23619936`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B73,C12
`Chr7:23619971`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B81
`Chr7:23621783`	`G`	`A`	EMS_canonical_SNV	stop_gained	1	B96
`Chr7:23621783`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B96
`Chr7:23621886`	`AGT`	`A`	2bp_deletion	frameshift_variant	1	B62
`Chr7:23621886`	`AGT`	`A`	2bp_deletion	CDS_variant	1	B62
`Chr7:23621904`	`G`	`GTC`	2bp_insertion	frameshift_variant	1	D11

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057774484.1

640 aa

320

640

INV_N

Glyco_hydro_32N

Glyco_hydro_32C

PF11837 INV_N 18-106 aa PF00251 Glyco_hydro_32N 114-433 aa PF08244 Glyco_hydro_32C 436-626 aa

XP_057774485.1

637 aa

318

637

INV_N

Glyco_hydro_32N

Glyco_hydro_32C

PF11837 INV_N 18-106 aa PF00251 Glyco_hydro_32N 114-430 aa PF08244 Glyco_hydro_32C 433-623 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057774484.1`	Pfam	`PF11837`	INV_N	Family	18	106	9.9e-09	36.4	Beta-fructofuranosidase, N-terminal domain
`XP_057774484.1`	Pfam	`PF00251`	Glyco_hydro_32N	Repeat	114	433	2e-100	337.1	Glycosyl hydrolases family 32 N-terminal domain
`XP_057774484.1`	Pfam	`PF08244`	Glyco_hydro_32C	Domain	436	626	1.2e-21	78.1	Glycosyl hydrolases family 32 C terminal
`XP_057774485.1`	Pfam	`PF11837`	INV_N	Family	18	106	9.8e-09	36.4	Beta-fructofuranosidase, N-terminal domain
`XP_057774485.1`	Pfam	`PF00251`	Glyco_hydro_32N	Repeat	114	430	2.3e-94	317.1	Glycosyl hydrolases family 32 N-terminal domain
`XP_057774485.1`	Pfam	`PF08244`	Glyco_hydro_32C	Domain	433	623	1.2e-21	78.2	Glycosyl hydrolases family 32 C terminal

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057918502.1
CCGTAGTAAAATTCCAATCCTCCATTCAGCATAACATGGCCACCGCGTCTCCTCCGGCGGCGAGATACGATCTGGAAGGCGCCACCTCCTACCTCCCCATCCCCGCCGGCCCTAATCAGCCCCGCCCCCGCCCTTCCACGAAGCTCCTCTCCGCCATTCTCTTCTCATCTTTCCTCCTAATCTCATTACTTCTCCTCTTCACAAACCACACCGCACCCTCTCAAGTCAAACTCAACGACGCCGCCGCTGCCCCTCACACT...

XM_057918501.1
TCCAATCCTCCATTCAGCATAACATGGCCACCGCGTCTCCTCCGGCGGCGAGATACGATCTGGAAGGCGCCACCTCCTACCTCCCCATCCCCGCCGGCCCTAATCAGCCCCGCCCCCGCCCTTCCACGAAGCTCCTCTCCGCCATTCTCTTCTCATCTTTCCTCCTAATCTCATTACTTCTCCTCTTCACAAACCACACCGCACCCTCTCAAGTCAAACTCAACGACGCCGCCGCTGCCCCTCACACTCCGTCGCGAGGC...

CDS

2 records

下载 CDS FASTA

LOC130993574
ATGGCCACCGCGTCTCCTCCGGCGGCGAGATACGATCTGGAAGGCGCCACCTCCTACCTCCCCATCCCCGCCGGCCCTAATCAGCCCCGCCCCCGCCCTTCCACGAAGCTCCTCTCCGCCATTCTCTTCTCATCTTTCCTCCTAATCTCATTACTTCTCCTCTTCACAAACCACACCGCACCCTCTCAAGTCAAACTCAACGACGCCGCCGCTGCCCCTCACACTCCGTCGCGAGGCGTGTCGCAGGGGGTGTCGGAGAA...

Protein

2 records

下载 Protein FASTA

XP_057774484.1
MATASPPAARYDLEGATSYLPIPAGPNQPRPRPSTKLLSAILFSSFLLISLLLLFTNHTAPSQVKLNDAAAAPHTPSRGVSQGVSEKVFRQVSANGLTFPWNSVMLSWQRTAFHFQPEQNWMNDPNGPLFHMGWYHLFYQYNQDSAVWGNITWGHAVSKDLIHWFHLPYAMVPDQWYDVNGVWTGSATILPDGQIIMLYTGDTNDAVQVQCLAYPANLSDPLLLHWVKSPSNPVLFPPPGIGSTDFRDPTTAWLSPGGDK...

XP_057774485.1
MATASPPAARYDLEGATSYLPIPAGPNQPRPRPSTKLLSAILFSSFLLISLLLLFTNHTAPSQVKLNDAAAAPHTPSRGVSQGVSEKVFRQVSANGLTFPWNSVMLSWQRTAFHFQPEQNWMNGPLFHMGWYHLFYQYNQDSAVWGNITWGHAVSKDLIHWFHLPYAMVPDQWYDVNGVWTGSATILPDGQIIMLYTGDTNDAVQVQCLAYPANLSDPLLLHWVKSPSNPVLFPPPGIGSTDFRDPTTAWLSPGGDKWRI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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