当前解析结果
SmilChr07G002504| 统一新 Gene ID | SmilChr07G002504 |
|---|---|
| 名称 | SmilChr07G002504 |
| 描述 | uncharacterized SmilChr07G002504 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 23748448 - 23750988 / + |
| NCBI Gene ID | LOC130993583 |
|---|---|
| GeneID | 130993583 |
| locus_tag | - |
| NCBI Name | LOC130993583 |
| 原始查询 | SmilChr07G002504 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:822266]; symbol=AT3G26580; hit=AT3G26580; species=arabidopsis; confidence=high |
| 产物 | Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:822266]; symbol=AT3G26580; hit=AT3G26580; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G26580 (AT3G26580)Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:822266] identity=59.1; qcov=1.02; evalue=4.99e-148; confidence=high |
| Rice | Os03g0428800- identity=63.2; qcov=0.569; evalue=3.49e-83; confidence=medium |
| GO | GO:0005515 (protein binding); GO:0009535 (chloroplast thylakoid membrane) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993583 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057774502.1 |
| 2 | Chloroplast membrane | 叶绿体膜 | 0.80000 | XP_057774502.1 |
| 3 | Chloroplast thylakoid | 类囊体 | 0.40000 | XP_057774502.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057774502.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057774502.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:23748755 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C79 |
Chr7:23748797 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C72,D1 |
Chr7:23748816 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr7:23748849 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C48 |
Chr7:23748887 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C48,D10 |
Chr7:23749055 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C61 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。