当前解析结果
SmilChr07G002551| 统一新 Gene ID | SmilChr07G002551 |
|---|---|
| 名称 | SmilChr07G002551 |
| 描述 | uncharacterized SmilChr07G002551 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 24199107 - 24202208 / + |
| NCBI Gene ID | LOC130993623 |
|---|---|
| GeneID | 130993623 |
| locus_tag | - |
| NCBI Name | LOC130993623 |
| 原始查询 | SmilChr07G002551 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:843387]; symbol=AT1G70505; hit=AT1G70505; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:843387]; symbol=AT1G70505; hit=AT1G70505; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G70505 (AT1G70505)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:843387] identity=44.2; qcov=1.04; evalue=1.34e-92; confidence=medium |
| Rice | Os01g0171800- identity=41.4; qcov=1.06; evalue=6.24e-81; confidence=medium |
| GO | GO:0016020 (membrane) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993623 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057774557.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.60000 | XP_057774561.1 |
| 3 | Endosome | 内体 | 0.40000 | XP_057774558.1 |
| 4 | Golgi apparatus | 高尔基体 | 0.40000 | XP_057774561.1 |
| 5 | Endosome membrane | 内体膜 | 0.20000 | XP_057774557.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:24199198 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A20,B137,B21,B85,C11 |
Chr7:24199455 |
C |
CT |
1bp_insertion | frameshift_variant | 23 | A4,B122,B13,B131,B23,B3,B33,B40,B68,B76,B87,B88,B91,C11,C13,C19,C2,C41,C52,C64,C69,C72,C74 |
Chr7:24199813 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B81 |
Chr7:24201622 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B14 |
Chr7:24201631 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B14 |
Chr7:24201651 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B14 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
8 records
下载 cDNA FASTA8 records
下载 CDS FASTA8 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。