当前解析结果
SmilChr07G002642| 统一新 Gene ID | SmilChr07G002642 |
|---|---|
| 名称 | SmilChr07G002642 |
| 描述 | uncharacterized SmilChr07G002642 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 25576632 - 25579970 / - |
| NCBI Gene ID | LOC130993707 |
|---|---|
| GeneID | 130993707 |
| locus_tag | - |
| NCBI Name | LOC130993707 |
| 原始查询 | SmilChr07G002642 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc finger MYND domain protein [Source:NCBI gene (formerly Entrezgene);Acc:843352]; symbol=AT1G70160; hit=AT1G70160; species=arabidopsis; confidence=high |
| 产物 | zinc finger MYND domain protein [Source:NCBI gene (formerly Entrezgene);Acc:843352]; symbol=AT1G70160; hit=AT1G70160; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G70160 (AT1G70160)zinc finger MYND domain protein [Source:NCBI gene (formerly Entrezgene);Acc:843352] identity=77.5; qcov=0.964; evalue=0; confidence=high |
| Rice | Os09g0392000- identity=76; qcov=0.954; evalue=0; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993707 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Golgi apparatus | 高尔基体 | 1.00000 | XP_057774715.1 |
| 2 | Cytoplasmic vesicle | 细胞质囊泡 | 0.20000 | XP_057774715.1 |
| 3 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057774715.1 |
| 4 | Lysosome | 溶酶体 | 0.20000 | XP_057774715.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057774715.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:25576796 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B137 |
Chr7:25577758 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B49 |
Chr7:25577804 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B126,B46,C61 |
Chr7:25577849 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B108,B119,B122,B81,C27 |
Chr7:25578387 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B120,B21,C55 |
Chr7:25578441 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B120,B21,C55 |
Chr7:25578472 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B120,B21,B36,C55 |
Chr7:25578524 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B21,C55 |
Chr7:25578527 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B138,B31,D6 |
Chr7:25578543 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B21,C55 |
Chr7:25578567 |
GT |
G |
1bp_deletion | frameshift_variant | 2 | B21,C55 |
Chr7:25578567 |
GT |
G |
1bp_deletion | CDS_variant | 2 | B21,C55 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。