Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G002692`

染色体: Chr07 坐标: 26259423-26264419 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G002692`
名称	SmilChr07G002692
描述	uncharacterized SmilChr07G002692
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	26259423 - 26264419 / `+`

ID 对照

NCBI Gene ID	`LOC130995697`
GeneID	`130995697`
locus_tag	`-`
NCBI Name	`LOC130995697`
原始查询	`SmilChr07G002692`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog
描述	Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:839604]; symbol=AT1G27150; hit=AT1G27150; species=arabidopsis; confidence=high
产物	Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:839604]; symbol=AT1G27150; hit=AT1G27150; species=arabidopsis; confidence=high
Arabidopsis	`AT1G27150` (AT1G27150) Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:839604] identity=60; qcov=0.978; evalue=0; confidence=high
Rice	`Os03g0689900` - identity=55.9; qcov=0.973; evalue=1.75e-152; confidence=high
GO	GO:0005515 (protein binding)
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130995697

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057777067.1`
2	Cytosol	细胞质基质	1.00000	`XP_057777067.1`
3	Nucleus	细胞核	0.00000	`XP_057777067.1`
4	Chromosome	染色体	0.00000	`XP_057777067.1`
5	Centromere	着丝粒	0.00000	`XP_057777067.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:26259636`	`G`	`GT`	1bp_insertion	frameshift_variant	17	A6,A9,B22,B50,B54,B64,B83,B89,B90,B92,B97,C1,C44,C45,C6,C62,C70
`Chr7:26260127`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B10,B107,C19,C82
`Chr7:26260209`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B132
`Chr7:26261731`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B102,B15,C51
`Chr7:26262141`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C45
`Chr7:26263777`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B1,B14,B73,C1,C83
`Chr7:26264072`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C18

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XR_009092245.1
AACAAATGGGCCAAAGTGTTACTGTATTTTTATTTTTTTTTCTGATGGAACCAAACTACCAAAGTAAACTTTAGTAGTACTATTTTAATATGGAGAGAGAGAGCGAGCCACATCATCATCACAAGTCTCAGACGAAAACTGTATGTTGAAGATAATCAACTTAAATAAGCAGTTATTTTATTGACGCGAGAAAACTCGGTGTATGTTGAAGATGGAAGCAGAGATGAAGTTGGACCGATGGGGCTACCAAGTTAGGACTT...

XM_057921084.1
TTTTGAGCAAACAAATGGGCCAAAGTGTTACTGTATTTTTATTTTTTTTTCTGATGGAACCAAACTACCAAAGTAAACTTTAGTAGTACTATTTTAATATGGAGAGAGAGAGCGAGCCACATCATCATCACAAGTCTCAGACGAAAACTGTATGTTGAAGATAATCAACTTAAATAAGCAGTTATTTTATTGACGCGAGAAAACTCGGTGTATGTTGAAGATGGAAGCAGAGATGAAGTTGGACCGATGGGGCTACCAAG...

CDS

2 records

下载 CDS FASTA

LOC130995697
ATGTTGAAGATGGAAGCAGAGATGAAGTTGGACCGATGGGGCTACCAAGTTAGGACTTCTTCCGATGCTTGCATTTCTGCTATCAACTCTTACTATCACCAGGTGCTTAGTTATGAAAGGAAAAGGGCAGTCATATTAGAAGCTCCAAAAAGTGATCCGGAGTGTGTTCTAGGCAACATTTTGGCTGCCCACTTTCTCTGCTCAGCTGATCCATCCCGGACCCCTGAATTCGTCAATGCAGCCAAGTCTCATCTTGAATG...

LOC130995697
ATGCTTGCATTTCTGCTATCAACTCTTACTATCACCAGTTATGAAAGGAAAAGGGCAGTCATATTAGAAGCTCCAAAAAGTGATCCGGAGTGTGTTCTAGGCAACATTTTGGCTGCCCACTTTCTCTGCTCAGCTGATCCATCCCGGACCCCTGAATTCGTCAATGCAGCCAAGTCTCATCTTGAATGTGCTACCTCATATGAGAAAGCAGTGTTTGAAGTCATCCAATATTTAATTTCTTCAGATAGAGATGATGATCT...

Protein

2 records

下载 Protein FASTA

XP_057777067.1
MLKMEAEMKLDRWGYQVRTSSDACISAINSYYHQVLSYERKRAVILEAPKSDPECVLGNILAAHFLCSADPSRTPEFVNAAKSHLECATSYEKAVFEVIQYLISSDRDDDLAVQLHSKLLQEFPKDLLSLKRAQVLCFYMGRLDLFLGIVEQVLPINEHEDYIYGMLAFALLELGRMDDAEKAGKKGYELNKDDVWSQHALCHVYQYECRFKEAVEFMINCAQSWGSLSSFMYTHNWWHIALCYLEGHAAMTKVQDIYDE...

XP_057777068.1
MLAFLLSTLTITSYERKRAVILEAPKSDPECVLGNILAAHFLCSADPSRTPEFVNAAKSHLECATSYEKAVFEVIQYLISSDRDDDLAVQLHSKLLQEFPKDLLSLKRAQVLCFYMGRLDLFLGIVEQVLPINEHEDYIYGMLAFALLELGRMDDAEKAGKKGYELNKDDVWSQHALCHVYQYECRFKEAVEFMINCAQSWGSLSSFMYTHNWWHIALCYLEGHAAMTKVQDIYDERIWKELERSDATAPEVYLNAAGLL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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