当前解析结果
SmilChr07G003048| 统一新 Gene ID | SmilChr07G003048 |
|---|---|
| 名称 | SmilChr07G003048 |
| 描述 | uncharacterized SmilChr07G003048 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 31696348 - 31697331 / - |
| NCBI Gene ID | LOC130994094 |
|---|---|
| GeneID | 130994094 |
| locus_tag | - |
| NCBI Name | LOC130994094 |
| 原始查询 | SmilChr07G003048 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:814982]; symbol=AT2G04420; hit=AT2G04420; species=arabidopsis; confidence=low |
| 产物 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:814982]; symbol=AT2G04420; hit=AT2G04420; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G04420 (AT2G04420)Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:814982] identity=27.9; qcov=0.507; evalue=2.89e-08; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994094 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057775111.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057775111.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057775111.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057775111.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057775111.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:31696356 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B107,B82 |
Chr7:31696367 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B121,B124,B56 |
Chr7:31696386 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B128,C36 |
Chr7:31696392 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B22 |
Chr7:31696393 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B133 |
Chr7:31696396 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B104,B133 |
Chr7:31696421 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C68 |
Chr7:31696442 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B77,B89,C45,C63 |
Chr7:31696456 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | C52 |
Chr7:31696456 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C52 |
Chr7:31696474 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B76,B77,B89,C45,C63 |
Chr7:31696478 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B17,B26,C17 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。