当前解析结果
SmilChr07G003088| 统一新 Gene ID | SmilChr07G003088 |
|---|---|
| 名称 | SmilChr07G003088 |
| 描述 | uncharacterized SmilChr07G003088 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 32604017 - 32605609 / - |
| NCBI Gene ID | LOC130994106 |
|---|---|
| GeneID | 130994106 |
| locus_tag | - |
| NCBI Name | LOC130994106 |
| 原始查询 | SmilChr07G003088 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669]; symbol=MUG3; hit=AT1G06740; species=arabidopsis; confidence=low |
| 产物 | MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669]; symbol=MUG3; hit=AT1G06740; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G06740 (MUG3)MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669] identity=34.1; qcov=0.703; evalue=1.51e-30; confidence=low |
| Rice | Os12g0597300- identity=33; qcov=0.687; evalue=5.8e-30; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994106 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057775124.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057775124.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057775124.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057775124.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057775124.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:32604038 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A4,C43 |
Chr7:32604046 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A23,B129,B24 |
Chr7:32604054 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A19,B40,C14,C54,D7 |
Chr7:32604057 |
A |
AGT |
2bp_insertion | frameshift_variant | 3 | B103,C49,C55 |
Chr7:32604057 |
A |
AGT |
2bp_insertion | CDS_variant | 3 | B103,C49,C55 |
Chr7:32604060 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C40 |
Chr7:32604062 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B18,B30,B50 |
Chr7:32604089 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr7:32604097 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B118,C78 |
Chr7:32604107 |
A |
AC |
1bp_insertion | frameshift_variant | 3 | B16,B34,C46 |
Chr7:32604107 |
A |
AC |
1bp_insertion | CDS_variant | 3 | B16,B34,C46 |
Chr7:32604121 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B24,B41 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。