当前解析结果
SmilChr07G003153| 统一新 Gene ID | SmilChr07G003153 |
|---|---|
| 名称 | SmilChr07G003153 |
| 描述 | uncharacterized mitochondrial protein AtMg00310-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 33465710 - 33466486 / + |
| NCBI Gene ID | LOC130994117 |
|---|---|
| GeneID | 130994117 |
| locus_tag | - |
| NCBI Name | LOC130994117 |
| 原始查询 | SmilChr07G003153 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=ATMG00310; species=arabidopsis; confidence=medium |
| 产物 | hit=ATMG00310; species=arabidopsis; confidence=medium |
| Arabidopsis | ATMG00310- identity=43.1; qcov=0.558; evalue=1.76e-37; confidence=medium |
| Rice | Os06g0484800- identity=34.4; qcov=0.868; evalue=6.88e-37; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994117 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057775136.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057775136.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057775136.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057775136.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057775136.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:33465719 |
C |
CA |
1bp_insertion | frameshift_variant | 2 | B2,B47 |
Chr7:33465719 |
C |
CA |
1bp_insertion | CDS_variant | 2 | B2,B47 |
Chr7:33465745 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B10,B50,B55,B84,C23 |
Chr7:33465774 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B100,B139,C26 |
Chr7:33465786 |
GT |
G |
1bp_deletion | frameshift_variant | 6 | A18,B124,B71,C52,C58,D3 |
Chr7:33465788 |
GT |
G |
1bp_deletion | frameshift_variant | 6 | A18,B124,B71,C52,C58,D3 |
Chr7:33465790 |
GTT |
G |
2bp_deletion | frameshift_variant | 16 | A10,A23,A9,B11,B118,B130,B131,B139,B40,B44,B68,B98,C38,C43,C76,C8 |
Chr7:33465793 |
G |
GC |
1bp_insertion | frameshift_variant | 15 | A10,A9,B11,B118,B130,B131,B139,B40,B44,B68,B98,C38,C43,C76,C8 |
Chr7:33465800 |
AC |
A |
1bp_deletion | frameshift_variant | 14 | A5,A8,B109,B113,B134,B138,B55,B59,B62,B76,C29,C9,D1,D8 |
Chr7:33465810 |
TGC |
T |
2bp_deletion | frameshift_variant | 7 | A18,B122,B124,B125,B71,C58,D3 |
Chr7:33465812 |
CT |
C |
1bp_deletion | frameshift_variant | 17 | A10,A9,B11,B118,B130,B131,B139,B40,B44,B68,B94,B98,C29,C38,C43,C76,C8 |
Chr7:33465819 |
GCC |
G |
2bp_deletion | frameshift_variant | 17 | A10,A9,B11,B118,B130,B131,B139,B40,B44,B68,B94,B98,C29,C38,C43,C76,C8 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。