当前解析结果
SmilChr07G003300| 统一新 Gene ID | SmilChr07G003300 |
|---|---|
| 名称 | SmilChr07G003300 |
| 描述 | uncharacterized SmilChr07G003300 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 34865948 - 34869080 / - |
| NCBI Gene ID | LOC130994156 |
|---|---|
| GeneID | 130994156 |
| locus_tag | - |
| NCBI Name | LOC130994156 |
| 原始查询 | SmilChr07G003300 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | aspartyl protease gag-polyprotein [Source:NCBI gene (formerly Entrezgene);Acc:28717693]; symbol=AT2G06105; hit=AT2G06105; species=arabidopsis; confidence=weak |
| 产物 | aspartyl protease gag-polyprotein [Source:NCBI gene (formerly Entrezgene);Acc:28717693]; symbol=AT2G06105; hit=AT2G06105; species=arabidopsis; confidence=weak |
| Arabidopsis | AT2G06105 (AT2G06105)aspartyl protease gag-polyprotein [Source:NCBI gene (formerly Entrezgene);Acc:28717693] identity=38.9; qcov=0.09; evalue=4.36e-07; confidence=weak |
| Rice | Os12g0292200- identity=29.8; qcov=0.117; evalue=2.49e-06; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994156 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057775169.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057775169.1 |
| 3 | Nucleus | 细胞核 | 0.40000 | XP_057775169.1 |
| 4 | Cytoplasmic granule | 细胞质颗粒 | 0.20000 | XP_057775169.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057775169.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:34866651 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A20,A5 |
Chr7:34866669 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A20,A5 |
Chr7:34866684 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B2,B56,C1 |
Chr7:34866691 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B112,B122,B64,B98,C59 |
Chr7:34866697 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A7 |
Chr7:34866704 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C1 |
Chr7:34866753 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B53,B71,C13 |
Chr7:34866761 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C38,D3 |
Chr7:34866763 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B53,B71 |
Chr7:34866779 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B104,B98 |
Chr7:34866786 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B134,B2,C44,C55 |
Chr7:34866789 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B53,B71,C86,D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。