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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr07G003345

染色体: Chr07 坐标: 35871597-35898349 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr07G003345
名称SmilChr07G003345
描述sodium/hydrogen exchanger 8
染色体 / SeqIDChr07 / NC_080393.1
坐标与链方向35871597 - 35898349 / +

ID 对照

NCBI Gene IDLOC130996209
GeneID130996209
locus_tag-
NCBI NameLOC130996209
原始查询SmilChr07G003345

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述sodium/hydrogen exchanger 8
产物sodium/hydrogen exchanger 8
ArabidopsisAT2G01980 (SOS1)
sodium proton exchanger, putative (NHX7) (SOS1) [Source:NCBI gene (formerly Entrezgene);Acc:814729]
identity=58.7; qcov=1; evalue=0; confidence=high
RiceOs12g0641100 (SOS1)
-
identity=59.7; qcov=1.02; evalue=0; confidence=high
GOGO:0009941 (chloroplast envelope); GO:0015385 (sodium:proton antiporter activity); GO:0016020 (membrane); GO:1902600 (proton transmembrane transport)
KEGG-
PfamPF00027 (cNMP_binding); PF00999 (Na_H_Exchanger)
InterPro-
eggNOG-
NRGeneID:130996209

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Vacuole 液泡 1.00000 XP_057777699.1
2 Vacuole membrane 液泡膜 1.00000 XP_057777699.1
3 Cell membrane 细胞膜 0.80000 XP_057777706.1
4 Nucleus 细胞核 0.00000 XP_057777699.1
5 Chromosome 染色体 0.00000 XP_057777699.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr7:35872073 C T EMS_canonical_SNV CDS_variant 5 A20,B124,C27,C30,C54
Chr7:35874065 G A EMS_canonical_SNV CDS_variant 1 B66
Chr7:35877191 G A EMS_canonical_SNV CDS_variant 1 D10
Chr7:35884452 C T EMS_canonical_SNV CDS_variant 1 C27
Chr7:35886182 C T EMS_canonical_SNV CDS_variant 2 B8,C48
Chr7:35893603 C T EMS_canonical_SNV CDS_variant 1 B124
Chr7:35894794 G A EMS_canonical_SNV CDS_variant 1 B124
Chr7:35895307 G A EMS_canonical_SNV CDS_variant 2 B128,C61
Chr7:35895942 G A EMS_canonical_SNV CDS_variant 1 B73
Chr7:35896004 C T EMS_canonical_SNV CDS_variant 3 A24,B134,D9
Chr7:35896113 C T EMS_canonical_SNV CDS_variant 1 D10
Chr7:35896119 G A EMS_canonical_SNV CDS_variant 1 B72

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057777699.1
1147 aa
N
1
574
1147
Na_H_Exchanger
cNMP_binding
C
PF00999 Na_H_Exchanger 38-444 aa PF00027 cNMP_binding 762-843 aa
XP_057777700.1
1147 aa
N
1
574
1147
Na_H_Exchanger
cNMP_binding
C
PF00999 Na_H_Exchanger 38-444 aa PF00027 cNMP_binding 762-843 aa
XP_057777701.1
1132 aa
N
1
566
1132
Na_H_Exchanger
cNMP_binding
C
PF00999 Na_H_Exchanger 38-429 aa PF00027 cNMP_binding 747-828 aa
XP_057777702.1
1131 aa
N
1
566
1131
Na_H_Exchanger
cNMP_binding
C
PF00999 Na_H_Exchanger 38-428 aa PF00027 cNMP_binding 746-827 aa
XP_057777703.1
1037 aa
N
1
518
1037
Na_H_Exchanger
cNMP_binding
C
PF00999 Na_H_Exchanger 1-334 aa PF00027 cNMP_binding 652-733 aa
XP_057777704.1
1028 aa
N
1
514
1028
Na_H_Exchanger
cNMP_binding
C
PF00999 Na_H_Exchanger 3-325 aa PF00027 cNMP_binding 643-724 aa
XP_057777706.1
955 aa
N
1
478
955
Na_H_Exchanger
cNMP_binding
C
PF00999 Na_H_Exchanger 1-252 aa PF00027 cNMP_binding 570-651 aa
XP_057777707.1
952 aa
N
1
476
952
Na_H_Exchanger
cNMP_binding
C
PF00999 Na_H_Exchanger 2-249 aa PF00027 cNMP_binding 567-648 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057777699.1 Pfam PF00999 Na_H_Exchanger Domain 38 444 6.6e-67 226.7 Sodium/hydrogen exchanger, transmembrane
XP_057777699.1 Pfam PF00027 cNMP_binding Domain 762 843 6.8e-07 29.9 Cyclic nucleotide-binding domain
XP_057777700.1 Pfam PF00999 Na_H_Exchanger Domain 38 444 6.6e-67 226.7 Sodium/hydrogen exchanger, transmembrane
XP_057777700.1 Pfam PF00027 cNMP_binding Domain 762 843 6.8e-07 29.9 Cyclic nucleotide-binding domain
XP_057777701.1 Pfam PF00999 Na_H_Exchanger Domain 38 429 3.7e-59 201.2 Sodium/hydrogen exchanger, transmembrane
XP_057777701.1 Pfam PF00027 cNMP_binding Domain 747 828 8.5e-07 29.6 Cyclic nucleotide-binding domain
XP_057777702.1 Pfam PF00999 Na_H_Exchanger Domain 38 428 2.7e-62 211.5 Sodium/hydrogen exchanger, transmembrane
XP_057777702.1 Pfam PF00027 cNMP_binding Domain 746 827 7e-07 29.8 Cyclic nucleotide-binding domain
XP_057777703.1 Pfam PF00999 Na_H_Exchanger Domain 1 334 1.6e-55 189.2 Sodium/hydrogen exchanger, transmembrane
XP_057777703.1 Pfam PF00027 cNMP_binding Domain 652 733 5.7e-07 30.1 Cyclic nucleotide-binding domain
XP_057777704.1 Pfam PF00999 Na_H_Exchanger Domain 3 325 2.4e-53 182.0 Sodium/hydrogen exchanger, transmembrane
XP_057777704.1 Pfam PF00027 cNMP_binding Domain 643 724 5.6e-07 30.2 Cyclic nucleotide-binding domain
XP_057777706.1 Pfam PF00999 Na_H_Exchanger Domain 1 252 4e-32 112.2 Sodium/hydrogen exchanger, transmembrane
XP_057777706.1 Pfam PF00027 cNMP_binding Domain 570 651 4.9e-07 30.3 Cyclic nucleotide-binding domain
XP_057777707.1 Pfam PF00999 Na_H_Exchanger Domain 2 249 4.2e-29 102.3 Sodium/hydrogen exchanger, transmembrane
XP_057777707.1 Pfam PF00027 cNMP_binding Domain 567 648 4.9e-07 30.3 Cyclic nucleotide-binding domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

8 records

下载 cDNA FASTA
XM_057921717.1
ATACAAAACGGAACCATTGCCACAATGCCAAGGGTTGCCCAACTATAAATTACGTCATTCAACATGTAAAACAGCTTTCACAACTCAGAAAAGGCGATGCGATTGCACCATTAATTGATTCGACTCATTTGGCAATCCGACTTGATCTCTCTCGAAGGAAATTGTCAGCGACCGAATCATGGCGTCGATTCTGGCGAGTGGAACGCTGTCGTCGCCGCTGAGACTGCTGGAAGAGGACTCTGCATCCGACGGTAATCCGA...
XM_057921716.1
GCCAAGGGTTGCCCAACTATAAATTACGTCATTCAACATGTAAAACAGCTTTCACAACTCAGAAAAGGCGATGCGATTGCACCATTAATTGATTCGACTCATTTGGCAATCCGACTGTATACTCACGCACTCTCTCTCTCTCTCTCTCTCAGAATCAGTCTGTAAAACACGAAGTTCAATTTGCCAAATTGAAGTTGCTGACTGCATGACAGTGATCTCTCTCGAAGGAAATTGTCAGCGACCGAATCATGGCGTCGATT...

CDS

8 records

下载 CDS FASTA
LOC130996209
ATGGCGTCGATTCTGGCGAGTGGAACGCTGTCGTCGCCGCTGAGACTGCTGGAAGAGGACTCTGCATCCGACGGTAATCCGACTGACGCGGTGCTCTTCGTCGGGATCAGCTTAGTGTTGGGGATAGCGTGTAGGCACGCTCTCAGAGGGACGCGCGTGCCCTACACTGTCGCTTTGCTTGTTCTCGGCATTGGACTTGGCGCCTTAGAACATGGAACACACCATGGGTTGGGAAAGATTGGCAATGGGATCCGTCTTTG...
LOC130996209
ATGGCGTCGATTCTGGCGAGTGGAACGCTGTCGTCGCCGCTGAGACTGCTGGAAGAGGACTCTGCATCCGACGGTAATCCGACTGACGCGGTGCTCTTCGTCGGGATCAGCTTAGTGTTGGGGATAGCGTGTAGGCACGCTCTCAGAGGGACGCGCGTGCCCTACACTGTCGCTTTGCTTGTTCTCGGCATTGGACTTGGCGCCTTAGAACATGGAACACACCATGGGTTGGGAAAGATTGGCAATGGGATCCGTCTTTG...

Protein

8 records

下载 Protein FASTA
XP_057777699.1
MASILASGTLSSPLRLLEEDSASDGNPTDAVLFVGISLVLGIACRHALRGTRVPYTVALLVLGIGLGALEHGTHHGLGKIGNGIRLWANIDPDLLLAVFLPALLFESSFSMEVHQIKRCMMQMFLLAVPGVLISTFCLGAALKLAFPYNWSWKTSLLLGGLLSATDPVAVVALLKELGASKKLSTIIEGESLMNDGTAIVVYQLFYRMVLGWNFNWGGLVKFLSRVSLGAVAMGLAFGIASVLWLGFIFNDTVIEISLTL...
XP_057777700.1
MASILASGTLSSPLRLLEEDSASDGNPTDAVLFVGISLVLGIACRHALRGTRVPYTVALLVLGIGLGALEHGTHHGLGKIGNGIRLWANIDPDLLLAVFLPALLFESSFSMEVHQIKRCMMQMFLLAVPGVLISTFCLGAALKLAFPYNWSWKTSLLLGGLLSATDPVAVVALLKELGASKKLSTIIEGESLMNDGTAIVVYQLFYRMVLGWNFNWGGLVKFLSRVSLGAVAMGLAFGIASVLWLGFIFNDTVIEISLTL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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