Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G003410`

染色体: Chr07 坐标: 37124678-37133815 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G003410`
名称	SmilChr07G003410
描述	probable protein arginine N-methyltransferase 6
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	37124678 - 37133815 / `-`

ID 对照

NCBI Gene ID	`LOC130995675`
GeneID	`130995675`
locus_tag	`-`
NCBI Name	`LOC130995675`
原始查询	`SmilChr07G003410`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	probable protein arginine N-methyltransferase 6
产物	probable protein arginine N-methyltransferase 6
Arabidopsis	`AT3G20020` (PRMT6) protein arginine methyltransferase 6 [Source:NCBI gene (formerly Entrezgene);Acc:821541] identity=66.7; qcov=1.04; evalue=0; confidence=high
Rice	`Os10g0489100` (OsPRMT6a) - identity=61.1; qcov=0.87; evalue=3.81e-161; confidence=high
GO	GO:0016274 (protein-arginine N-methyltransferase activity); GO:0018216 (peptidyl-arginine methylation)
KEGG	-
Pfam	PF01728 (FtsJ); PF02475 (TRM5-TYW2_MTfase); PF03848 (TehB); PF05175 (MTS); PF06325 (PrmA); PF08003 (Methyltransf_9); PF08241 (Methyltransf_11); PF13489 (Methyltransf_23); PF13649 (Methyltransf_25); PF13847 (Methyltransf_31); PF22528 (PRMT_C)
InterPro	-
eggNOG	-
NR	GeneID:130995675

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057777031.1`
2	Cytoplasm	细胞质	1.00000	`XP_057777033.1`
3	Cytosol	细胞质基质	1.00000	`XP_057777033.1`
4	Chromosome	染色体	0.00000	`XP_057777031.1`
5	Centromere	着丝粒	0.00000	`XP_057777031.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:37133538`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B127,B34

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057777031.1

436 aa

218

436

Methyltransf_9

MTS

TehB

Methyltransf_23

FtsJ

PrmA

TRM5-TYW2_MTfase

Methyltransf_31

Methyltransf_25

Methyltransf_11

PRMT_C

PF08003 Methyltransf_9 98-224 aa PF05175 MTS 109-191 aa PF03848 TehB 116-222 aa PF13489 Methyltransf_23 118-226 aa PF01728 FtsJ 119-191 aa PF06325 PrmA 119-193 aa PF02475 TRM5-TYW2_MTfase 119-197 aa PF13847 Methyltransf_31 120-225 aa PF13649 Methyltransf_25 123-219 aa PF08241 Methyltransf_11 124-221 aa PF22528 PRMT_C 226-330 aa PF22528 PRMT_C 367-424 aa

XP_057777033.1

414 aa

207

414

MTS

FtsJ

PrmA

Methyltransf_31

Methyltransf_23

Methyltransf_25

TehB

Methyltransf_11

PRMT_C

PF05175 MTS 97-169 aa PF01728 FtsJ 99-169 aa PF06325 PrmA 99-171 aa PF13847 Methyltransf_31 100-203 aa PF13489 Methyltransf_23 100-204 aa PF13649 Methyltransf_25 101-197 aa PF03848 TehB 101-200 aa PF08241 Methyltransf_11 102-199 aa PF22528 PRMT_C 204-308 aa PF22528 PRMT_C 345-402 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057777031.1`	Pfam	`PF08003`	Methyltransf_9	Family	98	224	1.1e-06	28.5	Protein of unknown function (DUF1698)
`XP_057777031.1`	Pfam	`PF05175`	MTS	Domain	109	191	5e-09	36.7	Methyltransferase small domain
`XP_057777031.1`	Pfam	`PF03848`	TehB	Family	116	222	1.6e-07	31.7	Tellurite resistance protein TehB
`XP_057777031.1`	Pfam	`PF13489`	Methyltransf_23	Domain	118	226	2.4e-08	34.6	Methyltransferase domain
`XP_057777031.1`	Pfam	`PF01728`	FtsJ	Family	119	191	4.4e-06	27.5	FtsJ-like methyltransferase
`XP_057777031.1`	Pfam	`PF06325`	PrmA	Family	119	193	3e-14	53.9	Ribosomal protein L11 methyltransferase (PrmA)
`XP_057777031.1`	Pfam	`PF02475`	TRM5-TYW2_MTfase	Domain	119	197	7.1e-07	30.0	TRM5/TYW2 methyltransferase domain
`XP_057777031.1`	Pfam	`PF13847`	Methyltransf_31	Domain	120	225	6.9e-09	36.4	Methyltransferase domain
`XP_057777031.1`	Pfam	`PF13649`	Methyltransf_25	Domain	123	219	7.9e-15	56.1	Methyltransferase domain
`XP_057777031.1`	Pfam	`PF08241`	Methyltransf_11	Domain	124	221	1.6e-12	48.6	Methyltransferase domain
`XP_057777031.1`	Pfam	`PF22528`	PRMT_C	Domain	226	330	1.8e-37	129.5	Arginine methyltransferase oligomerization subdomain
`XP_057777031.1`	Pfam	`PF22528`	PRMT_C	Domain	367	424	1.8e-37	129.5	Arginine methyltransferase oligomerization subdomain
`XP_057777033.1`	Pfam	`PF05175`	MTS	Domain	97	169	2.3e-08	34.5	Methyltransferase small domain
`XP_057777033.1`	Pfam	`PF01728`	FtsJ	Family	99	169	3.3e-05	24.6	FtsJ-like methyltransferase
`XP_057777033.1`	Pfam	`PF06325`	PrmA	Family	99	171	4.8e-14	53.3	Ribosomal protein L11 methyltransferase (PrmA)
`XP_057777033.1`	Pfam	`PF13847`	Methyltransf_31	Domain	100	203	2e-08	34.8	Methyltransferase domain
`XP_057777033.1`	Pfam	`PF13489`	Methyltransf_23	Domain	100	204	1.1e-07	32.4	Methyltransferase domain
`XP_057777033.1`	Pfam	`PF13649`	Methyltransf_25	Domain	101	197	8.3e-15	56.0	Methyltransferase domain
`XP_057777033.1`	Pfam	`PF03848`	TehB	Family	101	200	4.4e-07	30.3	Tellurite resistance protein TehB
`XP_057777033.1`	Pfam	`PF08241`	Methyltransf_11	Domain	102	199	1.4e-12	48.8	Methyltransferase domain
`XP_057777033.1`	Pfam	`PF22528`	PRMT_C	Domain	204	308	1.6e-37	129.7	Arginine methyltransferase oligomerization subdomain
`XP_057777033.1`	Pfam	`PF22528`	PRMT_C	Domain	345	402	1.6e-37	129.7	Arginine methyltransferase oligomerization subdomain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057921048.1
GCAGAGGTTTAAAGTAACGCTCTACACAATTACACACAAACGCCCCCTTCTTCTCTCTGAAGTGTGTCGAGCGACGGAGCAAATGTTTCAGTCGACGAGCGGCGGCAATGGCAGCGGAGTCGGCGCTGGAGTAGGTGACGGCGCATTTCACAATGGCTTCCTCCACGGAGGCGTTAGTGACGGTGCCCAATTGACTCGAAGTCGGCCGCGCAGGGGTAGCCGCCGCAGGCTCCATGACCAAGGCCCCGCTTCCGAGCCTA...

XM_057921050.1
GAGGTTTAAAGTAACGCTCTACACAATTACACACAAACGCCCCCTTCTTCTCTCTGAAGTGTGTCGAGCGACGGAGCAAATGTTTCAGTCGACGAGCGGCGGCAATGGCAGCGGAGTCGGCGCTGGAGTAGGTGACGGCGCATTTCACAATGGCTTCCTCCACGGAGGCGTTAGTGACGGTGCCCAATTGACTCGAAGTCGGCCGCGCAGGGGTAGCCGCCGCAGGCTCCATGACCAAGGCCCCGCTTCCGAGCCTAGGG...

CDS

2 records

下载 CDS FASTA

LOC130995675
ATGTTTCAGTCGACGAGCGGCGGCAATGGCAGCGGAGTCGGCGCTGGAGTAGGTGACGGCGCATTTCACAATGGCTTCCTCCACGGAGGCGTTAGTGACGGTGCCCAATTGACTCGAAGTCGGCCGCGCAGGGGTAGCCGCCGCAGGCTCCATGACCAAGGCCCCGCTTCCGAGCCTAGGGTTTCGCAGCAGCAGGAGCAACACGAAACAGAGAGGCCTCCTCGTCCCTGTACGGACTTCGATGTCGCCTATTTCAACTC...

Protein

2 records

下载 Protein FASTA

XP_057777031.1
MFQSTSGGNGSGVGAGVGDGAFHNGFLHGGVSDGAQLTRSRPRRGSRRRLHDQGPASEPRVSQQQEQHETERPPRPCTDFDVAYFNSYAHLGIHEEMIKDRARTDTYKNAIFQHRDQIAGKVVLDVGCGTGILSIFCAQAGAKRVYAVDASNIAVQANEVIKANNLSGTVIVLHGRVEDVEIDEKVDVIVSEWMGYMLLYESMLGSVITARDRWLKPGGLILPSYATLYMAPVSYPERYSESVDFWRNVYGIDMSAMMPL...

XP_057777033.1
MFQSTSGGNGSGVGAGVGDGAFHNGFLHGGVSDGAQLTRSRPRRGSRRRLHDQGPASEPRVSQQQEQHETERPPRPCTDFDVAYFNSYAHLGIHEEMIKVVLDVGCGTGILSIFCAQAGAKRVYAVDASNIAVQANEVIKANNLSGTVIVLHGRVEDVEIDEKVDVIVSEWMGYMLLYESMLGSVITARDRWLKPGGLILPSYATLYMAPVSYPERYSESVDFWRNVYGIDMSAMMPLAKQCAFEEPSVEMISGENVLTW...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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