当前解析结果
SmilChr07G003415| 统一新 Gene ID | SmilChr07G003415 |
|---|---|
| 名称 | SmilChr07G003415 |
| 描述 | uncharacterized SmilChr07G003415 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 37232324 - 37232791 / + |
| NCBI Gene ID | LOC130994186 |
|---|---|
| GeneID | 130994186 |
| locus_tag | - |
| NCBI Name | LOC130994186 |
| 原始查询 | SmilChr07G003415 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:828539]; symbol=AT4G24370; hit=AT4G24370; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:828539]; symbol=AT4G24370; hit=AT4G24370; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G24370 (AT4G24370)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:828539] identity=48; qcov=0.955; evalue=7.99e-26; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994186 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057775201.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057775201.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057775201.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057775201.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057775201.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:37232372 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A7,B93,C20,D7 |
Chr7:37232392 |
TG |
T |
1bp_deletion | frameshift_variant | 16 | A22,B1,B13,B136,B15,B23,B24,B40,B95,B98,C18,C27,C48,C53,C73,C9 |
Chr7:37232437 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B129 |
Chr7:37232443 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B9 |
Chr7:37232548 |
T |
TCA |
2bp_insertion | frameshift_variant | 3 | B136,B30,B93 |
Chr7:37232548 |
T |
TCA |
2bp_insertion | CDS_variant | 3 | B136,B30,B93 |
Chr7:37232550 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A13,B9 |
Chr7:37232603 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D8 |
Chr7:37232641 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B135,B24 |
Chr7:37232730 |
ATG |
A |
2bp_deletion | frameshift_variant | 68 | A1,A11,A19,A22,A5,A9,B10,B104,B106,B109,B11,B110,B111,B112,B113,B114,B118,B131,B137,B2,B22,B23,B27,B28,B42,B43,B47,B52,B60,B65,B71,B73,B76,B77,B8,B80,B89,B95,B97,B98,C1,C15,C24,C29,C30,C44,C45,C46,C48,C52,C54,C56,C57,C58,C59,C6,C61,C62,C64,C66,C78,C82,C86,C9,D10,D11,D6,D8 |
Chr7:37232739 |
A |
AG |
1bp_insertion | frameshift_variant | 18 | A2,A21,B101,B13,B132,B20,B28,B6,B63,B65,B83,B91,C35,C45,C56,C63,C67,C7 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。