当前解析结果
SmilChr07G003641| 统一新 Gene ID | SmilChr07G003641 |
|---|---|
| 名称 | SmilChr07G003641 |
| 描述 | uncharacterized SmilChr07G003641 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 43154047 - 43156411 / - |
| NCBI Gene ID | LOC130995674 |
|---|---|
| GeneID | 130995674 |
| locus_tag | - |
| NCBI Name | LOC130995674 |
| 原始查询 | SmilChr07G003641 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os02g0328500; species=rice; confidence=low |
| 产物 | hit=Os02g0328500; species=rice; confidence=low |
| Arabidopsis | AT2G24960 (AT2G24960)Myb/SANT-like DNA-binding domain protein [Source:NCBI gene (formerly Entrezgene);Acc:817035] identity=24; qcov=0.475; evalue=2.08e-06; confidence=weak |
| Rice | Os02g0328500- identity=28.7; qcov=0.541; evalue=1.24e-16; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130995674 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057777030.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057777030.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057777030.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057777030.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057777030.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:43154166 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B132,B52,B86,C35,C60 |
Chr7:43154179 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B61 |
Chr7:43154192 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C8 |
Chr7:43154194 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C37 |
Chr7:43154195 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A20,B110,B36,B56,B96 |
Chr7:43154218 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B118,B12 |
Chr7:43154227 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B41,B52,B86 |
Chr7:43154252 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B122,B140,C61,C73 |
Chr7:43154270 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B115,B45,B62 |
Chr7:43154297 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B118,B12,C47 |
Chr7:43154301 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A10,A7,C21,C33,C69 |
Chr7:43154303 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B118,B119,B12,C47 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。