当前解析结果
SmilChr07G003664| 统一新 Gene ID | SmilChr07G003664 |
|---|---|
| 名称 | SmilChr07G003664 |
| 描述 | uncharacterized SmilChr07G003664 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 43825772 - 43831500 / - |
| NCBI Gene ID | LOC130996264 |
|---|---|
| GeneID | 130996264 |
| locus_tag | - |
| NCBI Name | LOC130996264 |
| 原始查询 | SmilChr07G003664 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:827519]; symbol=AT4G17940; hit=AT4G17940; species=arabidopsis; confidence=medium |
| 产物 | Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:827519]; symbol=AT4G17940; hit=AT4G17940; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G17940 (AT4G17940)Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:827519] identity=40.8; qcov=1.21; evalue=5.52e-45; confidence=medium |
| Rice | Os10g0576600- identity=40.6; qcov=0.837; evalue=6.5e-35; confidence=medium |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130996264 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057777755.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057777754.1 |
| 3 | Cytosol | 细胞质基质 | 0.60000 | XP_057777754.1 |
| 4 | Cell membrane | 细胞膜 | 0.40000 | XP_057777755.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057777754.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:43831273 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B115,B82 |
Chr7:43831310 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B57 |
Chr7:43831364 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | B121 |
Chr7:43831364 |
GC |
G |
1bp_deletion | CDS_variant | 1 | B121 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。