当前解析结果
SmilChr07G003672| 统一新 Gene ID | SmilChr07G003672 |
|---|---|
| 名称 | SmilChr07G003672 |
| 描述 | uncharacterized SmilChr07G003672 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 44055160 - 44060307 / + |
| NCBI Gene ID | LOC130994256 |
|---|---|
| GeneID | 130994256 |
| locus_tag | - |
| NCBI Name | LOC130994256 |
| 原始查询 | SmilChr07G003672 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | BTB/POZ domain protein [Source:NCBI gene (formerly Entrezgene);Acc:824242]; symbol=AT3G50780; hit=AT3G50780; species=arabidopsis; confidence=weak |
| 产物 | BTB/POZ domain protein [Source:NCBI gene (formerly Entrezgene);Acc:824242]; symbol=AT3G50780; hit=AT3G50780; species=arabidopsis; confidence=weak |
| Arabidopsis | AT3G50780 (AT3G50780)BTB/POZ domain protein [Source:NCBI gene (formerly Entrezgene);Acc:824242] identity=65.2; qcov=0.287; evalue=4.82e-33; confidence=weak |
| Rice | Os03g0769400 (OSJNBb0106M04.9)- identity=63; qcov=0.287; evalue=1.96e-30; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994256 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057775279.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057775279.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057775279.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057775279.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057775279.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:44055187 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B100,B120,C84 |
Chr7:44055195 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B99,C80 |
Chr7:44055221 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C14,C80 |
Chr7:44055223 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C74 |
Chr7:44055249 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B14,B22,C74 |
Chr7:44055251 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | C10,C20,C57,C71,C82 |
Chr7:44055257 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B102 |
Chr7:44055268 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B118,B73,C59,D9 |
Chr7:44055274 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B100,B118,B73,C59,D9 |
Chr7:44055319 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B22,B83,C48,C54,C79 |
Chr7:44055331 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B22,B83,C48,C54,C79 |
Chr7:44055332 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B140,B55,C47 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。