当前解析结果
SmilChr07G003699| 统一新 Gene ID | SmilChr07G003699 |
|---|---|
| 名称 | SmilChr07G003699 |
| 描述 | uncharacterized SmilChr07G003699 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 44611547 - 44612635 / - |
| NCBI Gene ID | LOC130996273 |
|---|---|
| GeneID | 130996273 |
| locus_tag | - |
| NCBI Name | LOC130996273 |
| 原始查询 | SmilChr07G003699 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DUF740 family protein [Source:NCBI gene (formerly Entrezgene);Acc:840163]; symbol=AT1G32690; hit=AT1G32690; species=arabidopsis; confidence=low |
| 产物 | DUF740 family protein [Source:NCBI gene (formerly Entrezgene);Acc:840163]; symbol=AT1G32690; hit=AT1G32690; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G32690 (AT1G32690)DUF740 family protein [Source:NCBI gene (formerly Entrezgene);Acc:840163] identity=31.6; qcov=0.873; evalue=1.31e-25; confidence=low |
| Rice | Os02g0693000- identity=53.9; qcov=0.243; evalue=2.29e-13; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130996273 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 0.80000 | XP_057777767.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057777767.1 |
| 3 | Cytoplasm | 细胞质 | 0.20000 | XP_057777767.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057777767.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057777767.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:44611714 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B46 |
Chr7:44611760 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B12,B140,B55 |
Chr7:44611857 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr7:44611869 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C60 |
Chr7:44611912 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B47 |
Chr7:44611939 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C35,C40 |
Chr7:44612085 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C6 |
Chr7:44612164 |
GA |
* |
1bp_deletion | CDS_variant | 2 | B138,D11 |
Chr7:44612167 |
GAA |
G |
2bp_deletion | frameshift_variant | 1 | C44 |
Chr7:44612167 |
GAA |
G |
2bp_deletion | CDS_variant | 1 | C44 |
Chr7:44612197 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B136 |
Chr7:44612298 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C58 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。