Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G004315`

染色体: Chr07 坐标: 55705273-55708351 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G004315`
名称	SmilChr07G004315
描述	beta-fructofuranosidase, insoluble isoenzyme CWINV1-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	55705273 - 55708351 / `-`

ID 对照

NCBI Gene ID	`LOC130994846`
GeneID	`130994846`
locus_tag	`-`
NCBI Name	`LOC130994846`
原始查询	`SmilChr07G004315`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	beta-fructofuranosidase, insoluble isoenzyme CWINV1-like
产物	beta-fructofuranosidase%2C insoluble isoenzyme CWINV1-like
Arabidopsis	`AT3G13790` (ATBFRUCT1) Glycosyl hydrolases family 32 protein [Source:NCBI gene (formerly Entrezgene);Acc:820591] identity=53.6; qcov=0.931; evalue=0; confidence=high
Rice	`Os09g0255000` (OSINV1) - identity=49.3; qcov=0.95; evalue=0; confidence=high
GO	GO:0004553 (hydrolase activity, hydrolyzing O-glycosyl compounds); GO:0005975 (carbohydrate metabolic process)
KEGG	-
Pfam	PF00251 (Glyco_hydro_32N); PF08244 (Glyco_hydro_32C)
InterPro	-
eggNOG	-
NR	GeneID:130994846

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole	液泡	1.00000	`XP_057775932.1`
2	Vacuole membrane	液泡膜	0.40000	`XP_057775932.1`
3	Nucleus	细胞核	0.00000	`XP_057775932.1`
4	Chromosome	染色体	0.00000	`XP_057775932.1`
5	Centromere	着丝粒	0.00000	`XP_057775932.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:55705615`	`CA`	`C`	1bp_deletion	frameshift_variant	9	B114,B128,C19,C21,C30,C35,C5,C61,D1
`Chr7:55705629`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C27
`Chr7:55705701`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B122
`Chr7:55705703`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B26
`Chr7:55705736`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B57
`Chr7:55705749`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B100,B111,B35,C14,C82
`Chr7:55705784`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A20,C54
`Chr7:55705981`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B35,B57
`Chr7:55706002`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B1,B13,B33,B35,B62
`Chr7:55706015`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B26,B99,C77
`Chr7:55706147`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B26
`Chr7:55706165`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B122,C14,C82

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057775932.1

580 aa

290

580

Glyco_hydro_32N

Glyco_hydro_32C

PF00251 Glyco_hydro_32N 49-368 aa PF08244 Glyco_hydro_32C 371-563 aa

XP_057775933.1

577 aa

288

577

Glyco_hydro_32N

Glyco_hydro_32C

PF00251 Glyco_hydro_32N 49-365 aa PF08244 Glyco_hydro_32C 368-560 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057775932.1`	Pfam	`PF00251`	Glyco_hydro_32N	Repeat	49	368	3.1e-93	313.4	Glycosyl hydrolases family 32 N-terminal domain
`XP_057775932.1`	Pfam	`PF08244`	Glyco_hydro_32C	Domain	371	563	6.8e-23	82.2	Glycosyl hydrolases family 32 C terminal
`XP_057775933.1`	Pfam	`PF00251`	Glyco_hydro_32N	Repeat	49	365	4.1e-87	293.3	Glycosyl hydrolases family 32 N-terminal domain
`XP_057775933.1`	Pfam	`PF08244`	Glyco_hydro_32C	Domain	368	560	6.7e-23	82.2	Glycosyl hydrolases family 32 C terminal

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057919950.1
ATATATCAGTGTAATCTGCGTGCAATATTTGAGCTCTATTTGTGGGTTTAAAAATGGAGAAATATGTGATATGGGTAGTGTTATTGCAAGCTATTTTGATAGGTTATGCCATTAAAACTGGATATTTCGAAGAAAATAGAAATATTATTGAAGAATTTGATGAGGCGAAAGAGAAGCAGCCATACAGAACTGGATTCCATTTTCAACCTCCCAAAAACTGGATGAATGGACCAATGTACTATAATGGAGTGTACCATTTC...

XM_057919949.1
ATATATCAGTGTAATCTGCGTGCAATATTTGAGCTCTATTTGTGGGTTTAAAAATGGAGAAATATGTGATATGGGTAGTGTTATTGCAAGCTATTTTGATAGGTTATGCCATTAAAACTGGATATTTCGAAGAAAATAGAAATATTATTGAAGAATTTGATGAGGCGAAAGAGAAGCAGCCATACAGAACTGGATTCCATTTTCAACCTCCCAAAAACTGGATGAATGATCCAAATGGACCAATGTACTATAATGGAGTG...

CDS

2 records

下载 CDS FASTA

LOC130994846
ATGGAGAAATATGTGATATGGGTAGTGTTATTGCAAGCTATTTTGATAGGTTATGCCATTAAAACTGGATATTTCGAAGAAAATAGAAATATTATTGAAGAATTTGATGAGGCGAAAGAGAAGCAGCCATACAGAACTGGATTCCATTTTCAACCTCCCAAAAACTGGATGAATGGACCAATGTACTATAATGGAGTGTACCATTTCTTCTATCAGTATAACCCATATGGTGCAACATGGGGTAATGGTAACCTTTCATG...

LOC130994846
ATGGAGAAATATGTGATATGGGTAGTGTTATTGCAAGCTATTTTGATAGGTTATGCCATTAAAACTGGATATTTCGAAGAAAATAGAAATATTATTGAAGAATTTGATGAGGCGAAAGAGAAGCAGCCATACAGAACTGGATTCCATTTTCAACCTCCCAAAAACTGGATGAATGATCCAAATGGACCAATGTACTATAATGGAGTGTACCATTTCTTCTATCAGTATAACCCATATGGTGCAACATGGGGTAATGGTAA...

Protein

2 records

下载 Protein FASTA

XP_057775932.1
MEKYVIWVVLLQAILIGYAIKTGYFEENRNIIEEFDEAKEKQPYRTGFHFQPPKNWMNDPNGPMYYNGVYHFFYQYNPYGATWGNGNLSWAHSVSYNLVDWTHIEHALSPSEPYDLRGCWSGSVTILPDNNMPVIFYTSISVEGEEVQNLAMPRDTSDPFLREWVKSRHNPLIRPPSDIDPRSFRDPTTAWQKMDKTWCVLIGSQLGSDRAGILYTSRDFISWSRGDNPLHMSNRTGMWECPDFYPVSASGGDGLDTSAN...

XP_057775933.1
MEKYVIWVVLLQAILIGYAIKTGYFEENRNIIEEFDEAKEKQPYRTGFHFQPPKNWMNGPMYYNGVYHFFYQYNPYGATWGNGNLSWAHSVSYNLVDWTHIEHALSPSEPYDLRGCWSGSVTILPDNNMPVIFYTSISVEGEEVQNLAMPRDTSDPFLREWVKSRHNPLIRPPSDIDPRSFRDPTTAWQKMDKTWCVLIGSQLGSDRAGILYTSRDFISWSRGDNPLHMSNRTGMWECPDFYPVSASGGDGLDTSANGED...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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