Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G004326`

染色体: Chr07 坐标: 55822442-55825555 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G004326`
名称	SmilChr07G004326
描述	probable ADP,ATP carrier protein At5g56450
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	55822442 - 55825555 / `-`

ID 对照

NCBI Gene ID	`LOC130994915`
GeneID	`130994915`
locus_tag	`-`
NCBI Name	`LOC130994915`
原始查询	`SmilChr07G004326`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	probable ADP,ATP carrier protein At5g56450
产物	probable ADP%2CATP carrier protein At5g56450
Arabidopsis	`AT5G56450` (PM-ANT) Mitochondrial substrate carrier family protein [Source:NCBI gene (formerly Entrezgene);Acc:835746] identity=71.7; qcov=0.959; evalue=3.24e-166; confidence=high
Rice	`Os05g0302700` - identity=39.2; qcov=0.965; evalue=3.61e-67; confidence=medium
GO	GO:0005471 (ATP:ADP antiporter activity); GO:0005743 (mitochondrial inner membrane); GO:0140021 (mitochondrial ADP transmembrane transport); GO:1990544 (mitochondrial ATP transmembrane transport)
KEGG	-
Pfam	PF00153 (Mito_carr)
InterPro	-
eggNOG	-
NR	GeneID:130994915

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057776036.1`
2	Mitochondrion membrane	线粒体膜	1.00000	`XP_057776036.1`
3	Mitochondrion inner membrane	线粒体内膜	1.00000	`XP_057776036.1`
4	Nucleus	细胞核	0.00000	`XP_057776036.1`
5	Chromosome	染色体	0.00000	`XP_057776036.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:55822665`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B123,C73
`Chr7:55822750`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B130,B80
`Chr7:55822811`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A14,B36,C29,C71
`Chr7:55822822`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B108,B13,B26,B82
`Chr7:55823065`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B27,B50,B76,C15,C8
`Chr7:55823107`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C26
`Chr7:55823123`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C72,C9
`Chr7:55823128`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C26
`Chr7:55823168`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C75
`Chr7:55823227`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B14,C59
`Chr7:55823230`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	C2,C23,C73
`Chr7:55823233`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C87

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057776036.1

317 aa

158

317

Mito_carr

PF00153 Mito_carr 20-118 aa PF00153 Mito_carr 128-218 aa PF00153 Mito_carr 226-313 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057776036.1`	Pfam	`PF00153`	Mito_carr	Repeat	20	118	4.1e-66	219.5	Mitochondrial carrier protein
`XP_057776036.1`	Pfam	`PF00153`	Mito_carr	Repeat	128	218	4.1e-66	219.5	Mitochondrial carrier protein
`XP_057776036.1`	Pfam	`PF00153`	Mito_carr	Repeat	226	313	4.1e-66	219.5	Mitochondrial carrier protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

1 records

下载 cDNA FASTA

XM_057920053.1
ATTGTCAACAACCAAAGCGCCGCCTACTCCAAATTCCGTTGCCAATGTAAGAAATCTTGCGATAAGGAAAAATCAAGAAGATTGGGTGAAAAAAAGTTGTTGCTGCCATAAATGGATATATAGAAAAGGAAAACCAAAAGAAAAGGCCGAAGGGGAGAAAAAAGCCACCATTTTTTTTGAAATCGTTTCCCGAAAAAAAAAAAAAGTCTTGCAAGTTGCAACAGAATCGGGCAAGCCCATTTCGCGAGCTAGCTTGATTT...

CDS

1 records

下载 CDS FASTA

LOC130994915
ATGGCGGCGGAGGACGGCGAGGCAGGGGAGGAGAAGGGCGACGGCGGTGCGCTGAGCAGTTTCCACAGGGATCTGACGGCGGGGGCGCTGATGGGGGGCGTGGTGCACACGATTGTGGCCCCCATAGAGAGGGCGAAGCTGCTGCTGCAGACGCAGGAGAGCAACGCGGCGATCTTGGCTGGCGGCCGCCACCGGAGGTTTAGAGGGATGGTTGATTGCATTGCGCGCACGATGAGAGAAGAAGGGGTTTTGTCGCTGTG...

Protein

1 records

下载 Protein FASTA

XP_057776036.1
MAAEDGEAGEEKGDGGALSSFHRDLTAGALMGGVVHTIVAPIERAKLLLQTQESNAAILAGGRHRRFRGMVDCIARTMREEGVLSLWRGNGSSVIRYYPSVALNFSLKDLYRNVLRENSREGSLLSGPSANFLAGSAAGCTTLIIIYPLDIAHTRLAADLGRTETRQFRGIGHFLSTIYKKDGVRGVYKGLPASLQGMVVHRGLYFGGFDTLKEMMAEGSGSDVVLWKRWATAQAVTTAAGMLSYPLDTVRRRMMMQSGT...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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