当前解析结果
SmilChr07G004407| 统一新 Gene ID | SmilChr07G004407 |
|---|---|
| 名称 | SmilChr07G004407 |
| 描述 | uncharacterized SmilChr07G004407 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 56700611 - 56701729 / + |
| NCBI Gene ID | LOC130994458 |
|---|---|
| GeneID | 130994458 |
| locus_tag | - |
| NCBI Name | LOC130994458 |
| 原始查询 | SmilChr07G004407 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | cytochrome P450, family 78, subfamily A, polypeptide 7 [Source:NCBI gene (formerly Entrezgene);Acc:830858]; symbol=CYP78A7; hit=AT5G09970; species=arabidopsis; confidence=weak |
| 产物 | cytochrome P450, family 78, subfamily A, polypeptide 7 [Source:NCBI gene (formerly Entrezgene);Acc:830858]; symbol=CYP78A7; hit=AT5G09970; species=arabidopsis; confidence=weak |
| Arabidopsis | AT5G09970 (CYP78A7)cytochrome P450, family 78, subfamily A, polypeptide 7 [Source:NCBI gene (formerly Entrezgene);Acc:830858] identity=59.6; qcov=0.244; evalue=2e-09; confidence=weak |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994458 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057775484.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057775484.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057775484.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057775484.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057775484.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:56701232 |
CCT |
C |
2bp_deletion | frameshift_variant | 1 | B104 |
Chr7:56701232 |
CCT |
C |
2bp_deletion | CDS_variant | 1 | B104 |
Chr7:56701239 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A18,B11,B140,C12,C14 |
Chr7:56701241 |
T |
TC |
1bp_insertion | frameshift_variant | 1 | D4 |
Chr7:56701241 |
T |
TC |
1bp_insertion | CDS_variant | 1 | D4 |
Chr7:56701242 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B53,B8 |
Chr7:56701260 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B104 |
Chr7:56701260 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr7:56701267 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B118,B36,B50,B57,B85 |
Chr7:56701346 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B97 |
Chr7:56701409 |
AC |
A |
1bp_deletion | frameshift_variant | 8 | A18,B10,B14,B35,B51,C45,C50,C8 |
Chr7:56701428 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C31 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。