当前解析结果
SmilChr07G004696| 统一新 Gene ID | SmilChr07G004696 |
|---|---|
| 名称 | SmilChr07G004696 |
| 描述 | uncharacterized SmilChr07G004696 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 59884053 - 59887861 / - |
| NCBI Gene ID | LOC130995265 |
|---|---|
| GeneID | 130995265 |
| locus_tag | - |
| NCBI Name | LOC130995265 |
| 原始查询 | SmilChr07G004696 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | electron carrier/iron ion-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:840167]; symbol=AT1G32730; hit=AT1G32730; species=arabidopsis; confidence=high |
| 产物 | electron carrier/iron ion-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:840167]; symbol=AT1G32730; hit=AT1G32730; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G32730 (AT1G32730)electron carrier/iron ion-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:840167] identity=46; qcov=1.04; evalue=2.11e-92; confidence=high |
| Rice | Os08g0129500 (P0582D05.115)- identity=39.8; qcov=1.12; evalue=5.27e-77; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130995265 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057776479.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057776479.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057776479.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057776479.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057776479.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:59884264 |
G |
A |
EMS_canonical_SNV | stop_gained | 97 | A13,A15,A16,A19,A22,A24,A25,A4,A5,A8,A9,B1,B105,B115,B118,B119,B120,B123,B125,B128,B132,B133,B138,B18,B19,B21,B22,B24,B27,B28,B33,B34,B35,B36,B37,B40,B45,B50,B52,B54,B58,B59,B64,B65,B67,B71,B74,B77,B78,B79,B84,B86,B9,B93,B95,C12,C13,C15,C16,C19,C2,C21,C23,C24,C29,C30,C32,C33,C42,C44,C45,C5,C53,C57,C60,C62,C7,C70,C71,C72,C74,C75,C76,C77,C78,C79,C8,C81,C85,C86,D1,D10,D11,D2,D4,D5,D7 |
Chr7:59884316 |
G |
GAA |
2bp_insertion | frameshift_variant | 1 | D11 |
Chr7:59884316 |
G |
GAA |
2bp_insertion | CDS_variant | 1 | D11 |
Chr7:59884354 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C37 |
Chr7:59884383 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B129,B137,B62 |
Chr7:59884421 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A6,C28 |
Chr7:59884457 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B139,B54 |
Chr7:59884570 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B98 |
Chr7:59884579 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A6,C28 |
Chr7:59884582 |
C |
CT |
1bp_insertion | frameshift_variant | 133 | A10,A11,A13,A16,A18,A19,A22,A25,A4,A5,A6,A8,A9,B1,B10,B103,B105,B107,B108,B113,B117,B118,B119,B12,B123,B127,B128,B129,B13,B133,B137,B138,B14,B16,B17,B18,B19,B21,B22,B24,B25,B28,B29,B3,B30,B33,B35,B36,B37,B40,B42,B43,B44,B45,B5,B50,B52,B54,B59,B60,B62,B63,B64,B65,B7,B71,B74,B77,B78,B79,B80,B81,B84,B86,B87,B89,B9,B90,B91,B93,B97,B98,C10,C12,C13,C15,C16,C19,C2,C23,C26,C28,C29,C3,C30,C33,C34,C35,C4,C40,C45,C46,C48,C5,C57,C60,C62,C64,C65,C66,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C81,C82,C83,C85,C86,C87,D1,D10,D11,D2,D6,D7 |
Chr7:59884653 |
C |
CT |
1bp_insertion | frameshift_variant | 2 | B6,C67 |
Chr7:59884653 |
C |
CT |
1bp_insertion | CDS_variant | 2 | B6,C67 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。