当前解析结果
SmilChr07G004732| 统一新 Gene ID | SmilChr07G004732 |
|---|---|
| 名称 | SmilChr07G004732 |
| 描述 | uncharacterized SmilChr07G004732 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 60191608 - 60195057 / - |
| NCBI Gene ID | LOC130995293 |
|---|---|
| GeneID | 130995293 |
| locus_tag | - |
| NCBI Name | LOC130995293 |
| 原始查询 | SmilChr07G004732 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:817065]; symbol=AT2G25270; hit=AT2G25270; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:817065]; symbol=AT2G25270; hit=AT2G25270; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G25270 (AT2G25270)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:817065] identity=55.4; qcov=0.844; evalue=0; confidence=high |
| Rice | Os02g0799300- identity=49.8; qcov=0.935; evalue=0; confidence=high |
| GO | GO:0005886 (plasma membrane); GO:0009506 (plasmodesma) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130995293 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057776512.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057776512.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057776512.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057776512.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057776512.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:60191799 |
T |
TCC |
2bp_insertion | frameshift_variant | 4 | B58,C23,C27,C31 |
Chr7:60191799 |
T |
TCC |
2bp_insertion | CDS_variant | 4 | B58,C23,C27,C31 |
Chr7:60192031 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B108,B58,C23,C27,C31 |
Chr7:60192138 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B104,B13,B73,C85 |
Chr7:60192442 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A13,A24,B34,B9,C42 |
Chr7:60192473 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A13,A24,B34,B9,C42 |
Chr7:60192804 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B140,B46 |
Chr7:60192923 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C5 |
Chr7:60193103 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B140,B46 |
Chr7:60193145 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr7:60193168 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:60193226 |
T |
TA |
1bp_insertion | frameshift_variant | 13 | A2,A5,B112,B49,B69,B88,C20,C54,C56,C57,C58,C72,C80 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。