Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G000037`

染色体: Chr08 坐标: 254191-256964 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G000037`
名称	SmilChr08G000037
描述	uncharacterized SmilChr08G000037
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	254191 - 256964 / `-`

ID 对照

NCBI Gene ID	`LOC130999662`
GeneID	`130999662`
locus_tag	`-`
NCBI Name	`LOC130999662`
原始查询	`SmilChr08G000037`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	GPI-anchored adhesin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:819004]; symbol=AT2G43990; hit=AT2G43990; species=arabidopsis; confidence=low
产物	GPI-anchored adhesin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:819004]; symbol=AT2G43990; hit=AT2G43990; species=arabidopsis; confidence=low
Arabidopsis	`AT2G43990` (AT2G43990) GPI-anchored adhesin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:819004] identity=27.8; qcov=0.997; evalue=5.92e-23; confidence=low
Rice	`Os11g0247500` - identity=36.8; qcov=0.212; evalue=2.52e-11; confidence=weak
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130999662

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057781246.1`
2	Cytoskeleton	细胞骨架	0.20000	`XP_057781246.1`
3	Chromosome	染色体	0.00000	`XP_057781246.1`
4	Centromere	着丝粒	0.00000	`XP_057781246.1`
5	Chromatin	染色质	0.00000	`XP_057781246.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:254997`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B94
`Chr8:255030`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B13,B24
`Chr8:255053`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B38,B39,B71,C62
`Chr8:255108`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr8:255177`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B84,C5
`Chr8:255212`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A15,B60,B84,D4
`Chr8:255260`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B94
`Chr8:255270`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B104,B60,B84,D4
`Chr8:255349`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B44
`Chr8:255393`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C20
`Chr8:255398`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C39
`Chr8:255400`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C36

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057925264.1
CTCTGATCCAAATTTTTGTAATTTACTGGTCCAGCTCTAATTAATTAGTGCAATTAATTATTAATTGACTCTATTATAAGTAGGTTGTAAATAATTGGAAGCAAATAGAGTCAACTAACCTTTTTAAAATTTGTAGTGTTGTGAGCCCAACGGTCACTAAGCAAGAACAAAGCAAAAACAAGTGAAGCTGAGTTTGAATCAAAAAATTTGCAGACACCAAAAATTCTGCTATGTCTGATGATGGAGGCCCAGAAAAAAGG...

XM_057925263.1
GAGTCAACTAACCTTTTTAAAATTTGTAGTGTTGTGAGCCCAACGGTCACTAAGCAAGAACAAAGCAAAAACAAGTGAAGCTGAGTTTGAATCAAAAAATTTGCAGACACCAAAAATTCTGCTATGTCTGATGATGGAGGCCCAGAAAAAAGGGTTGAGCTTGAAGCAGAAGATGAAAAGCGAGAAGAGAAGCCCGCTTCTGAATCTCAGCGCCGTTCAATTTCATAAATCCAACACTAAAATTGCCTCAAACTCATCTT...

CDS

2 records

下载 CDS FASTA

LOC130999662
ATGATGGAGGCCCAGAAAAAAGGGTTGAGCTTGAAGCAGAAGATGAAAAGCGAGAAGAGAAGCCCGCTTCTGAATCTCAGCGCCGTTCAATTTCATAAATCCAACACTAAAATTGCCTCAAACTCATCTTCTGCTGCTGCCCCTGCATCAGCTGAACCTCGAAATTTGAGATTTTTAATTTCTTCAAACTCATCTTCTGATGCTTCATCTTCTTCGAGGGCTCGGTTGGGGAGAAAGCCCAGATCTTTGCCCAAATCAGG...

Protein

2 records

下载 Protein FASTA

XP_057781246.1
MMEAQKKGLSLKQKMKSEKRSPLLNLSAVQFHKSNTKIASNSSSAAAPASAEPRNLRFLISSNSSSDASSSSRARLGRKPRSLPKSGSNFSAKSVRSKENELPRKPYSEKPKKKTDSISKAAQTSKISCGRGNSVKVLKKNLEKLGETPLFKSSTPVVSSGVRRNAAEESNGGNGSAASAKTPPVEVSVSPEIQSKMVVSKSAATPVCYGAGHLLSGVTDKRKCRRRGSLRGGFEKVNLFDDEENDKKVVDDLQDPLIPL...

XP_057781247.1
MMEAQKKGLSLKQKMKSEKRSPLLNLSAVQFHKSNTKIASNSSSAAAPASAEPRNLRFLISSNSSSDASSSSRARLGRKPRSLPKSGSNFSAKSVRSKENELPRKPYSEKPKKKTDSISKAAQTSKISCGRGNSVKVLKKNLEKLGETPLFKSSTPVVSSGVRRNAAEESNGGNGSAASAKTPPVEVSVSPEIQSKMVVSKSAATPVCYGAGHLLSGVTDKRKCRRRGSLRGGFEKVNLFDDEENDKKVVDDLQDPLIPL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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