Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G000038`

染色体: Chr08 坐标: 258294-260146 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G000038`
名称	SmilChr08G000038
描述	bidirectional sugar transporter NEC1-like
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	258294 - 260146 / `+`

ID 对照

NCBI Gene ID	`LOC130999664`
GeneID	`130999664`
locus_tag	`-`
NCBI Name	`LOC130999664`
原始查询	`SmilChr08G000038`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	bidirectional sugar transporter NEC1-like
产物	bidirectional sugar transporter NEC1-like
Arabidopsis	`AT2G39060` (SWEET9) Nodulin MtN3 family protein [Source:NCBI gene (formerly Entrezgene);Acc:818492] identity=45.8; qcov=0.959; evalue=3.45e-54; confidence=high
Rice	`Os02g0513100` (OsSWEET15) - identity=41.7; qcov=0.886; evalue=2.36e-56; confidence=medium
GO	GO:0008643 (carbohydrate transport); GO:0016020 (membrane); GO:0051119 (sugar transmembrane transporter activity)
KEGG	-
Pfam	PF03083 (MtN3_slv)
InterPro	-
eggNOG	-
NR	GeneID:130999664

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057781250.1`
2	Vacuole	液泡	0.20000	`XP_057781250.1`
3	Vacuole membrane	液泡膜	0.20000	`XP_057781250.1`
4	Nucleus	细胞核	0.00000	`XP_057781251.1`
5	Chromosome	染色体	0.00000	`XP_057781251.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:258526`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B44,C51
`Chr8:258692`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B1
`Chr8:258752`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B84,C5
`Chr8:258836`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B37,B78,C56,C8,C82
`Chr8:259375`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D2
`Chr8:259381`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D2
`Chr8:259394`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C78
`Chr8:259586`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C78
`Chr8:259680`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B94
`Chr8:259832`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C37
`Chr8:259844`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B11,C51
`Chr8:259857`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C78

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057781250.1

286 aa

143

286

MtN3_slv

PF03083 MtN3_slv 12-97 aa PF03083 MtN3_slv 133-217 aa

XP_057781251.1

246 aa

123

246

MtN3_slv

PF03083 MtN3_slv 12-97 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057781250.1`	Pfam	`PF03083`	MtN3_slv	Repeat	12	97	3.1e-51	172.0	Sugar efflux transporter for intercellular exchange
`XP_057781250.1`	Pfam	`PF03083`	MtN3_slv	Repeat	133	217	3.1e-51	172.0	Sugar efflux transporter for intercellular exchange
`XP_057781251.1`	Pfam	`PF03083`	MtN3_slv	Repeat	12	97	2.7e-31	108.2	Sugar efflux transporter for intercellular exchange

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057925267.1
TGTGAAAATAAAATACAGTGTCTATTTGTTTTCTACAGAAGTGTTTTGCAGCACTTCAATAAAGAAAAATAAAATGGCATTTTTGAGTGCCGACAAATTAGCTATCATATTTGGCCTCTTGGGCAATATAATATCTTTTCTCGTATTCTTGGCGCCATTGCCAACTTTTTACAGAATTTGTAGGAAGAAATCATCGGAAGGGTTTCAATCAATACCATATTCGATCTCATTTTTCAGCGCATCATTGTTGCTTTACTACG...

XM_057925268.1
TGTGAAAATAAAATACAGTGTCTATTTGTTTTCTACAGAAGTGTTTTGCAGCACTTCAATAAAGAAAAATAAAATGGCATTTTTGAGTGCCGACAAATTAGCTATCATATTTGGCCTCTTGGGCAATATAATATCTTTTCTCGTATTCTTGGCGCCATTGCCAACTTTTTACAGAATTTGTAGGAAGAAATCATCGGAAGGGTTTCAATCAATACCATATTCGATCTCATTTTTCAGCGCATCATTGTTGCTTTACTACG...

CDS

2 records

下载 CDS FASTA

LOC130999664
ATGGCATTTTTGAGTGCCGACAAATTAGCTATCATATTTGGCCTCTTGGGCAATATAATATCTTTTCTCGTATTCTTGGCGCCATTGCCAACTTTTTACAGAATTTGTAGGAAGAAATCATCGGAAGGGTTTCAATCAATACCATATTCGATCTCATTTTTCAGCGCATCATTGTTGCTTTACTACGCCTACCTTAAAACCAATGCTTATATGATTGTTAGCATTAATGGTATTGGTTGTGCCATTGAAGCACTTTACAT...

Protein

2 records

下载 Protein FASTA

XP_057781250.1
MAFLSADKLAIIFGLLGNIISFLVFLAPLPTFYRICRKKSSEGFQSIPYSISFFSASLLLYYAYLKTNAYMIVSINGIGCAIEALYIFLYIVYAPKKVKIFTMRWIVLFNGGGLGVIMLVSLLAVKGSKRVALVGWVCAIINIAVFAAPLSVMRQVIRTRSVEFMPFALSFFLSLCAASWFFHGFFIRDYYIALPNILGLLLGVTQMILYFIYKDKTKRVQVIEDSISKSEKDIEMNINFDKSVENEKKVGDTNYELEEN...

XP_057781251.1
MAFLSADKLAIIFGLLGNIISFLVFLAPLPTFYRICRKKSSEGFQSIPYSISFFSASLLLYYAYLKTNAYMIVSINGIGCAIEALYIFLYIVYAPKKVKIFTMRWIVLFNGGGLGVIMLVSLLAVKGSKRVALVGWVCAIINIAVFAAPLSVMLPNILGLLLGVTQMILYFIYKDKTKRVQVIEDSISKSEKDIEMNINFDKSVENEKKVGDTNYELEENASNLKKDIEMKMNFDEEIKNISTNGK

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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