Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G000118`

染色体: Chr08 坐标: 733673-737831 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G000118`
名称	SmilChr08G000118
描述	acyl-coenzyme A thioesterase 2, chloroplastic
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	733673 - 737831 / `+`

ID 对照

NCBI Gene ID	`LOC130999744`
GeneID	`130999744`
locus_tag	`-`
NCBI Name	`LOC130999744`
原始查询	`SmilChr08G000118`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	acyl-coenzyme A thioesterase 2, chloroplastic
产物	acyl-coenzyme A thioesterase 2%2C chloroplastic
Arabidopsis	`AT2G30720` (AT2G30720) Thioesterase/thiol ester dehydrase-isomerase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817623] identity=70.3; qcov=0.85; evalue=0; confidence=high
Rice	`Os09g0517700` - identity=69; qcov=0.833; evalue=0; confidence=high
GO	GO:0006637 (acyl-CoA metabolic process); GO:0047617 (fatty acyl-CoA hydrolase activity)
KEGG	-
Pfam	PF03061 (4HBT)
InterPro	-
eggNOG	-
NR	GeneID:130999744

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057781344.1`
2	Chloroplast	叶绿体	0.80000	`XP_057781344.1`
3	Mitochondrion matrix	线粒体基质	0.40000	`XP_057781345.1`
4	Nucleus	细胞核	0.00000	`XP_057781345.1`
5	Chromosome	染色体	0.00000	`XP_057781345.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:733964`	`C`	`CT`	1bp_insertion	frameshift_variant	1	B45
`Chr8:733964`	`C`	`CT`	1bp_insertion	CDS_variant	1	B45
`Chr8:735764`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B105,C59
`Chr8:735797`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C51
`Chr8:735820`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B136
`Chr8:735996`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A24,A7,B6,C67
`Chr8:736105`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B114,B47,C72
`Chr8:736140`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B24,C82,D7
`Chr8:736204`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B105,C59
`Chr8:736350`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B13,B54,B65,C4
`Chr8:736417`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A10,B7,B76,B9,C39
`Chr8:736554`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B13

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057781344.1

508 aa

254

508

4HBT

PF03061 4HBT 177-246 aa

XP_057781345.1

492 aa

246

492

4HBT

PF03061 4HBT 177-246 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057781344.1`	Pfam	`PF03061`	4HBT	Domain	177	246	6.5e-10	39.9	Thioesterase superfamily
`XP_057781345.1`	Pfam	`PF03061`	4HBT	Domain	177	246	6.2e-10	40.0	Thioesterase superfamily

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057925361.1
ATTTATATTTTAATTTTATTTAATATTTATATTTGACTAATAGTAATAATAAAAAAGGTCACGTCTTCTCAATATGAGTATTGAGAGCTCAGTCGTCCGTCAATGGCGCCTTGATTTCAGAAACTATCCAATCACACTCCATTGATAAACCCCTCGATTCTCTCTCATCATTTCCAGCTGAATGCATCTATGAAAACTCCACCAAAACCAGTTTTCCACTTCCTTTTCGATCTCCCCACCAAAAAAATCCTCCCCAATTC...

XM_057925362.1
ATTTATATTTTAATTTTATTTAATATTTATATTTGACTAATAGTAATAATAAAAAAGGTCACGTCTTCTCAATATGAGTATTGAGAGCTCAGTCGTCCGTCAATGGCGCCTTGATTTCAGAAACTATCCAATCACACTCCATTGATAAACCCCTCGATTCTCTCTCATCATTTCCAGCTGAATGCATCTATGAAAACTCCACCAAAACCAGTTTTCCACTTCCTTTTCGATCTCCCCACCAAAAAAATCCTCCCCAATTC...

CDS

2 records

下载 CDS FASTA

LOC130999744
ATGAAAACTCCACCAAAACCAGTTTTCCACTTCCTTTTCGATCTCCCCACCAAAAAAATCCTCCCCAATTCACCCCTAATTCGACAAGACTGCAACAAAACCCTAAAAAATGGATTCCTCATCCCCAAATTTCTCGATTCCATTGCACAATTCGATAAATCCACTCAACGAAGATCAATCTCATCCGCGCACTCGGACCCTCCCGCCTCGGATGCAGTCTCCGTCGCTTCCACGGCGAGTTCGCCGTCGGAGGCGATCGA...

Protein

2 records

下载 Protein FASTA

XP_057781344.1
MKTPPKPVFHFLFDLPTKKILPNSPLIRQDCNKTLKNGFLIPKFLDSIAQFDKSTQRRSISSAHSDPPASDAVSVASTASSPSEAIDAGSSIRKPISLWPGMYHSPVTNALWEARSKLFEKTSNGSENGSAQSELIAKKPAESRTSILYKFSSDYILREQYRNPWNEIRMGKLLEDLDALAGTISFKHCSSKDSSTRPLILVTASVDKMVLRKPIKIDTDLTIAGAVTWVGRSSMEIQLEVAQSSQETSDPSDAVALTAN...

XP_057781345.1
MKTPPKPVFHFLFDLPTKKILPNSPLIRQDCNKTLKNGFLIPKFLDSIAQFDKSTQRRSISSAHSDPPASDAVSVASTASSPSEAIDAGSSIRKPISLWPGMYHSPVTNALWEARSKLFEKTSNGSENGSAQSELIAKKPAESRTSILYKFSSDYILREQYRNPWNEIRMGKLLEDLDALAGTISFKHCSSKDSSTRPLILVTASVDKMVLRKPIKIDTDLTIAGAVTWVGRSSMEIQLEVAQSSQETSDPSDAVALTAN...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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