当前解析结果
SmilChr08G000121| 统一新 Gene ID | SmilChr08G000121 |
|---|---|
| 名称 | SmilChr08G000121 |
| 描述 | uncharacterized SmilChr08G000121 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 763270 - 766421 / + |
| NCBI Gene ID | LOC130999747 |
|---|---|
| GeneID | 130999747 |
| locus_tag | - |
| NCBI Name | LOC130999747 |
| 原始查询 | SmilChr08G000121 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | stress response protein [Source:NCBI gene (formerly Entrezgene);Acc:825149]; symbol=AT3G59800; hit=AT3G59800; species=arabidopsis; confidence=high |
| 产物 | stress response protein [Source:NCBI gene (formerly Entrezgene);Acc:825149]; symbol=AT3G59800; hit=AT3G59800; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G59800 (AT3G59800)stress response protein [Source:NCBI gene (formerly Entrezgene);Acc:825149] identity=62.4; qcov=1; evalue=3.47e-55; confidence=high |
| Rice | Os04g0496600- identity=80.8; qcov=0.132; evalue=5.06e-09; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130999747 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057781348.1 |
| 2 | Nucleoplasm | 核质 | 0.20000 | XP_057781348.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057781348.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057781348.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057781348.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:763575 |
G |
GCA |
2bp_insertion | frameshift_variant | 1 | B66 |
Chr8:763575 |
G |
GCA |
2bp_insertion | CDS_variant | 1 | B66 |
Chr8:765284 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B67,D4 |
Chr8:765401 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B45 |
Chr8:765534 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C22 |
Chr8:766020 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B67,D4 |
Chr8:766048 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B35,C58,C80 |
Chr8:766076 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C15 |
Chr8:766077 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C15 |
Chr8:766110 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B133,B3,B76 |
Chr8:766114 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B35,B98,C58,C80 |
Chr8:766118 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B126,B13,B57 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。