当前解析结果
SmilChr08G000416| 统一新 Gene ID | SmilChr08G000416 |
|---|---|
| 名称 | SmilChr08G000416 |
| 描述 | uncharacterized SmilChr08G000416 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 2963632 - 2969835 / - |
| NCBI Gene ID | LOC131000006 |
|---|---|
| GeneID | 131000006 |
| locus_tag | - |
| NCBI Name | LOC131000006 |
| 原始查询 | SmilChr08G000416 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836137]; symbol=AT5G60150; hit=AT5G60150; species=arabidopsis; confidence=weak |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836137]; symbol=AT5G60150; hit=AT5G60150; species=arabidopsis; confidence=weak |
| Arabidopsis | AT5G60150 (AT5G60150)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836137] identity=71.2; qcov=0.064; evalue=2.02e-26; confidence=weak |
| Rice | Os12g0102700- identity=68.3; qcov=0.052; evalue=2.4e-21; confidence=weak |
| GO | GO:0008017 (microtubule binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131000006 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057781709.1 |
| 2 | Cytoskeleton | 细胞骨架 | 0.80000 | XP_057781709.1 |
| 3 | Centrosome | 中心体 | 0.40000 | XP_057781709.1 |
| 4 | Spindle | Spindle | 0.40000 | XP_057781709.1 |
| 5 | Spindle pole | Spindle pole | 0.40000 | XP_057781709.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:2965143 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A1,A16,A3,B16 |
Chr8:2965212 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr8:2965540 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B104,B15,B75,C51 |
Chr8:2965553 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr8:2965632 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B129 |
Chr8:2965647 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B33,B60,B79 |
Chr8:2965680 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | D10,D11 |
Chr8:2965683 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A2,B2 |
Chr8:2965718 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B41 |
Chr8:2965720 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr8:2965745 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A14 |
Chr8:2965799 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C6 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
7 records
下载 cDNA FASTA7 records
下载 CDS FASTA7 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。