当前解析结果
SmilChr08G000468| 统一新 Gene ID | SmilChr08G000468 |
|---|---|
| 名称 | SmilChr08G000468 |
| 描述 | uncharacterized SmilChr08G000468 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 3329466 - 3330136 / - |
| NCBI Gene ID | LOC131000057 |
|---|---|
| GeneID | 131000057 |
| locus_tag | - |
| NCBI Name | LOC131000057 |
| 原始查询 | SmilChr08G000468 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:817389]; symbol=AT2G28410; hit=AT2G28410; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:817389]; symbol=AT2G28410; hit=AT2G28410; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G28410 (AT2G28410)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:817389] identity=42.4; qcov=0.792; evalue=1.22e-09; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131000057 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057781800.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057781800.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057781800.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057781800.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057781800.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:3329744 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B68,C58 |
Chr8:3329781 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B42,B43,C39,C6 |
Chr8:3329787 |
TG |
T |
1bp_deletion | frameshift_variant | 1 | B44 |
Chr8:3329787 |
TG |
T |
1bp_deletion | CDS_variant | 1 | B44 |
Chr8:3329805 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr8:3329816 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B120 |
Chr8:3329842 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A14,B123,B58,B89 |
Chr8:3329898 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B14 |
Chr8:3329899 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A4,B21,B47,B97,C25 |
Chr8:3329918 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B5,B61,C6 |
Chr8:3329962 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B124 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。