Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G000479`

染色体: Chr08 坐标: 3422276-3432377 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G000479`
名称	SmilChr08G000479
描述	protein ENHANCED DISEASE RESISTANCE 2-like
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	3422276 - 3432377 / `-`

ID 对照

NCBI Gene ID	`LOC131000069`
GeneID	`131000069`
locus_tag	`-`
NCBI Name	`LOC131000069`
原始查询	`SmilChr08G000479`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	protein ENHANCED DISEASE RESISTANCE 2-like
产物	protein ENHANCED DISEASE RESISTANCE 2-like
Arabidopsis	`AT2G28320` (AT2G28320) Pleckstrin homology (PH) and lipid-binding START domains-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:817379] identity=66.3; qcov=0.963; evalue=0; confidence=high
Rice	`Os02g0102800` (B1370C05.34-1) - identity=27.9; qcov=1.02; evalue=9.64e-56; confidence=low
GO	GO:0008289 (lipid binding)
KEGG	-
Pfam	PF00169 (PH); PF01852 (START); PF07059 (EDR2_C)
InterPro	-
eggNOG	-
NR	GeneID:131000069

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	0.40000	`XP_057781812.1`
2	Cell membrane	细胞膜	0.40000	`XP_057781814.1`
3	Endoplasmic reticulum	内质网	0.20000	`XP_057781812.1`
4	Golgi apparatus	高尔基体	0.20000	`XP_057781812.1`
5	Nucleus	细胞核	0.00000	`XP_057781814.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:3422405`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C27
`Chr8:3422674`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B34
`Chr8:3424632`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B110,B73,C60
`Chr8:3424644`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B114,B53,C63,C67
`Chr8:3424861`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A23,B125,B55,B88
`Chr8:3424885`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B124
`Chr8:3425344`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B124,B86,C73
`Chr8:3425464`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A8,B69,B86,D11
`Chr8:3425667`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B34
`Chr8:3425669`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C51
`Chr8:3426155`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C82
`Chr8:3426180`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B118,B65,B82,C78

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057781812.1

730 aa

365

730

START

EDR2_C

PF00169 PH 11-113 aa PF01852 START 196-330 aa PF07059 EDR2_C 514-721 aa

XP_057781813.1

687 aa

344

687

START

EDR2_C

PF01852 START 153-287 aa PF07059 EDR2_C 471-678 aa

XP_057781814.1

592 aa

296

592

START

EDR2_C

PF00169 PH 11-114 aa PF01852 START 196-330 aa PF07059 EDR2_C 514-570 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057781812.1`	Pfam	`PF00169`	PH	Domain	11	113	1.2e-09	39.3	PH domain
`XP_057781812.1`	Pfam	`PF01852`	START	Domain	196	330	1e-18	68.2	START domain
`XP_057781812.1`	Pfam	`PF07059`	EDR2_C	Domain	514	721	2.1e-75	253.9	Protein ENHANCED DISEASE RESISTANCE 2, C-terminal
`XP_057781813.1`	Pfam	`PF01852`	START	Domain	153	287	9.3e-19	68.3	START domain
`XP_057781813.1`	Pfam	`PF07059`	EDR2_C	Domain	471	678	1.8e-75	254.1	Protein ENHANCED DISEASE RESISTANCE 2, C-terminal
`XP_057781814.1`	Pfam	`PF00169`	PH	Domain	11	114	1e-09	39.6	PH domain
`XP_057781814.1`	Pfam	`PF01852`	START	Domain	196	330	7e-19	68.7	START domain
`XP_057781814.1`	Pfam	`PF07059`	EDR2_C	Domain	514	570	4.4e-12	47.0	Protein ENHANCED DISEASE RESISTANCE 2, C-terminal

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057925829.1
ATTTCTGTTGCTTTTAACAAAGGAGTAAAAACAAACATCCAACCAACGTATGCCTAGAGAGAGAGAGAGAGAGATTTATGAAGGCATCGGGCGACGCCATTTTCACAATAAACAACAGTTTTCTCTCTCTACATATTCCTTCTCTCACACACCATCATAGAGCAGCTGCGAAGTGTGTGAGCTCCGCGTATTGCCGCACGCTTCCATGATTTGACTTGAATCCGACATTTTCCTTTCCAAATTCCTTCGATTTTGGGGGA...

XM_057925830.1
TGCGCGTGCATGCATGTTGGATGATGAGGAAACATATTTTTCGCTCCTGTGGTCTTTTTATCTCTTTCATAATTTTCGTTTTGCAAACTGGATTCACCTACCTTGGGTGCATTGTTAGATATGAGGCGGCCTCATATTCTACTACTTGATCCTGTTAGAAGTGCCATTATTGATTCCTGCATAAGGGTGACTGACAATGGAAGGGAGAGCATTCAGAGGAAGGTCTTTTTCATCTTTACTCTTTATAACACTTCTAATCA...

CDS

3 records

下载 CDS FASTA

LOC131000069
ATGGCGGCTTCGCAGAGTGATGGTGGAAGGATGGAAGGATGGCTGTATTCGATACGATCGAATCGGATTGGGCTTCAGTATTCGAGGAAACGCTACTTCATTCTACAGGATCACCTGCTCAGGAGCTTCAAATCGGTGCCAGCTTCCCCCGATGAGGATCCTGTTAGAAGTGCCATTATTGATTCCTGCATAAGGGTGACTGACAATGGAAGGGAGAGCATTCAGAGGAAGGTCTTTTTCATCTTTACTCTTTATAACAC...

LOC131000069
ATGAGGCGGCCTCATATTCTACTACTTGATCCTGTTAGAAGTGCCATTATTGATTCCTGCATAAGGGTGACTGACAATGGAAGGGAGAGCATTCAGAGGAAGGTCTTTTTCATCTTTACTCTTTATAACACTTCTAATCACACCGATCAACTGAAGTTGGGAGCAAACAGGCCCGAAGAAGCCGCAAGATGGATCCAGTCTTTCCAGGAATCAGCTTTAAAGCCAAACCAGAATCAAGGAGATTTTGAACTTTCAAGACG...

Protein

3 records

下载 Protein FASTA

XP_057781812.1
MAASQSDGGRMEGWLYSIRSNRIGLQYSRKRYFILQDHLLRSFKSVPASPDEDPVRSAIIDSCIRVTDNGRESIQRKVFFIFTLYNTSNHTDQLKLGANRPEEAARWIQSFQESALKPNQNQGDFELSRRVPQSLRLNYSSKHSYSIDWTVFSSSVSDAMTSDVIAPSPWKIFGCQNGLRLFKEAKDKESHRKWDDHPAIMAVGVVDATSEAIFQTLMSLGPSRSEWDFCFHKGSVIEHIDGHNDIVHKLLYHDWLPWGM...

XP_057781813.1
MRRPHILLLDPVRSAIIDSCIRVTDNGRESIQRKVFFIFTLYNTSNHTDQLKLGANRPEEAARWIQSFQESALKPNQNQGDFELSRRVPQSLRLNYSSKHSYSIDWTVFSSSVSDAMTSDVIAPSPWKIFGCQNGLRLFKEAKDKESHRKWDDHPAIMAVGVVDATSEAIFQTLMSLGPSRSEWDFCFHKGSVIEHIDGHNDIVHKLLYHDWLPWGMKRRDLLLRRYWRREEDGTYVILYHSVFHLKCPPKRGYVRACLK...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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