当前解析结果
SmilChr08G000717| 统一新 Gene ID | SmilChr08G000717 |
|---|---|
| 名称 | SmilChr08G000717 |
| 描述 | uncharacterized SmilChr08G000717 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 5319388 - 5322417 / - |
| NCBI Gene ID | LOC131000295 |
|---|---|
| GeneID | 131000295 |
| locus_tag | - |
| NCBI Name | LOC131000295 |
| 原始查询 | SmilChr08G000717 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Fe(3+) dicitrate transport system permease [Source:NCBI gene (formerly Entrezgene);Acc:832231]; symbol=AT5G21070; hit=AT5G21070; species=arabidopsis; confidence=high |
| 产物 | Fe(3+) dicitrate transport system permease [Source:NCBI gene (formerly Entrezgene);Acc:832231]; symbol=AT5G21070; hit=AT5G21070; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G21070 (AT5G21070)Fe(3+) dicitrate transport system permease [Source:NCBI gene (formerly Entrezgene);Acc:832231] identity=90.1; qcov=0.982; evalue=2.7e-142; confidence=high |
| Rice | Os01g0277700- identity=84.3; qcov=0.982; evalue=2.52e-134; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131000295 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 0.80000 | XP_057782120.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.80000 | XP_057782120.1 |
| 3 | Mitochondrion | 线粒体 | 0.20000 | XP_057782120.1 |
| 4 | Golgi apparatus | 高尔基体 | 0.20000 | XP_057782120.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057782120.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:5319864 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C71 |
Chr8:5319928 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A3,A9,C15,D6 |
Chr8:5319976 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C15 |
Chr8:5320739 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B45 |
Chr8:5320916 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B136,B45 |
Chr8:5322164 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B52,C80 |
Chr8:5322182 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A4,B107,D9 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。