Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G000741`

染色体: Chr08 坐标: 5484098-5491842 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G000741`
名称	SmilChr08G000741
描述	molybdopterin biosynthesis protein CNX1
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	5484098 - 5491842 / `+`

ID 对照

NCBI Gene ID	`LOC131000319`
GeneID	`131000319`
locus_tag	`-`
NCBI Name	`LOC131000319`
原始查询	`SmilChr08G000741`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	molybdopterin biosynthesis protein CNX1
产物	molybdopterin biosynthesis protein CNX1
Arabidopsis	`AT5G20990` (B73) molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) [Source:NCBI gene (formerly Entrezgene);Acc:832224] identity=67.3; qcov=0.968; evalue=0; confidence=high
Rice	`Os04g0661600` - identity=65.5; qcov=0.661; evalue=0; confidence=high
GO	GO:0005737 (cytoplasm); GO:0005829 (cytosol); GO:0006777 (Mo-molybdopterin cofactor biosynthetic process); GO:0018315 (molybdenum incorporation into molybdenum-molybdopterin complex); GO:0061599 (molybdopterin molybdotransferase activity)
KEGG	smil00790 (Folate biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01240 (Biosynthesis of cofactors - Salvia miltiorrhiza (redroot sage))
Pfam	PF00994 (MoCF_biosynth); PF03453 (MoeA_N); PF03454 (MoeA_C)
InterPro	-
eggNOG	-
NR	GeneID:131000319

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057782155.1`
2	Cytoplasm	细胞质	0.20000	`XP_057782155.1`
3	Mitochondrion	线粒体	0.20000	`XP_057782155.1`
4	Nucleus	细胞核	0.00000	`XP_057782155.1`
5	Chromosome	染色体	0.00000	`XP_057782155.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:5484174`	`GA`	`G`	1bp_deletion	frameshift_variant	42	A13,A15,A5,A7,B115,B118,B120,B127,B139,B15,B4,B50,B53,B61,B63,B69,B73,B80,B87,B88,B94,C21,C27,C41,C43,C49,C50,C56,C60,C69,C71,C73,C75,C78,C82,C84,C9,D2,D6,D7,D8,D9
`Chr8:5484208`	`AT`	`A`	1bp_deletion	frameshift_variant	88	A1,A14,A15,A18,A6,A9,B1,B100,B101,B103,B104,B108,B110,B115,B117,B124,B125,B132,B134,B136,B137,B14,B16,B18,B19,B22,B3,B35,B39,B42,B43,B44,B45,B48,B51,B55,B56,B57,B58,B61,B68,B72,B73,B74,B77,B81,B82,B84,B90,B91,B92,B96,B97,B98,C10,C12,C15,C16,C18,C20,C22,C25,C26,C29,C33,C34,C39,C40,C45,C46,C48,C49,C55,C57,C64,C66,C7,C71,C73,C75,C76,C79,C85,C87,C9,D1,D10,D4
`Chr8:5484220`	`TG`	`T`	1bp_deletion	frameshift_variant	1	B98
`Chr8:5484220`	`TG`	`T`	1bp_deletion	CDS_variant	1	B98
`Chr8:5484266`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B1,B2,B46
`Chr8:5484357`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A22,B107,C24,C86,D7
`Chr8:5484910`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A15,B98
`Chr8:5486027`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B135,B28,B95,B99,C26
`Chr8:5486037`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C46
`Chr8:5486062`	`ACG`	`A`	2bp_deletion	frameshift_variant	45	A11,A2,A21,A6,B102,B114,B122,B130,B17,B37,B40,B51,B52,B54,B6,B64,B65,B75,B83,B93,B99,C12,C13,C18,C32,C34,C37,C4,C44,C52,C57,C58,C59,C6,C61,C62,C67,C68,C70,C8,C80,C81,C82,C87,D6
`Chr8:5486066`	`A`	`ATG`	2bp_insertion	frameshift_variant	45	A11,A2,A21,A6,B102,B114,B122,B130,B17,B37,B40,B51,B52,B54,B6,B64,B65,B75,B83,B93,B99,C12,C13,C18,C32,C34,C37,C4,C44,C52,C57,C58,C59,C6,C61,C62,C67,C68,C70,C8,C80,C81,C82,C87,D6
`Chr8:5486890`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C30

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057782155.1

688 aa

344

688

MoeA_N

MoCF_biosynth

MoeA_C

MoCF_biosynth

PF03453 MoeA_N 34-198 aa PF00994 MoCF_biosynth 211-359 aa PF03454 MoeA_C 374-447 aa PF00994 MoCF_biosynth 492-640 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057782155.1`	Pfam	`PF03453`	MoeA_N	Family	34	198	8.5e-40	136.8	MoeA N-terminal region (domain I and II)
`XP_057782155.1`	Pfam	`PF00994`	MoCF_biosynth	Domain	211	359	1.6e-64	216.7	Probable molybdopterin binding domain
`XP_057782155.1`	Pfam	`PF03454`	MoeA_C	Domain	374	447	4.1e-11	43.7	MoeA C-terminal region (domain IV)
`XP_057782155.1`	Pfam	`PF00994`	MoCF_biosynth	Domain	492	640	1.6e-64	216.7	Probable molybdopterin binding domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

1 records

下载 cDNA FASTA

XM_057926172.1
AAACTGAGTGAAAAATATGGAAAAAAGAAGAGGAGATAAATAGGCTGAAAATGAGGACACGAGAAGGAAAAGAAAAGAAAAGAAAAGAAGAGAAAGAATTGATTAAGCGGATTTTGATAGTTTGGGAAATGGGAGAAGTAAGAAATATCTTGTCTGTTGAAGAGGCGGCGGAGATAGTGCTGAGTGTCGCGCAGAGGCTGCCACCGGTCACGGTATCTCTCCACCACGCACTCGGCAAAATCTTGGCCCAAGACGCCTCC...

CDS

1 records

下载 CDS FASTA

LOC131000319
ATGAGGACACGAGAAGGAAAAGAAAAGAAAAGAAAAGAAGAGAAAGAATTGATTAAGCGGATTTTGATAGTTTGGGAAATGGGAGAAGTAAGAAATATCTTGTCTGTTGAAGAGGCGGCGGAGATAGTGCTGAGTGTCGCGCAGAGGCTGCCACCGGTCACGGTATCTCTCCACCACGCACTCGGCAAAATCTTGGCCCAAGACGCCTCCGCTCCCGACCCACACCCGCCTTACCCCGCATCTATCAAGGATGGGTATGC...

Protein

1 records

下载 Protein FASTA

XP_057782155.1
MRTREGKEKKRKEEKELIKRILIVWEMGEVRNILSVEEAAEIVLSVAQRLPPVTVSLHHALGKILAQDASAPDPHPPYPASIKDGYAVVASDGPGEYPVITESRAGDDGIDVTVTSGTVAYVTTGGPIPNGADAVIQVEDTVQVESASAGQKRVRVLKQVTQGLDIRPVGCDIAKGDVVLKSGELLAAAEIGLLATVGVTSVKVYPMPKVAVLSTGNELVEPTTESLKRGQIRDSNRAMILAAAVQQQCEVLDLGIVHDD...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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