当前解析结果
SmilChr08G000772| 统一新 Gene ID | SmilChr08G000772 |
|---|---|
| 名称 | SmilChr08G000772 |
| 描述 | uncharacterized SmilChr08G000772 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 5686469 - 5688000 / - |
| NCBI Gene ID | LOC131000352 |
|---|---|
| GeneID | 131000352 |
| locus_tag | - |
| NCBI Name | LOC131000352 |
| 原始查询 | SmilChr08G000772 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | confidence=no_hit |
| 产物 | confidence=no_hit |
| Arabidopsis | -- |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131000352 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057782204.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057782204.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057782204.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057782204.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057782204.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:5686794 |
CA |
C |
1bp_deletion | frameshift_variant | 50 | A13,A23,A25,A9,B101,B105,B107,B108,B11,B110,B114,B117,B119,B12,B120,B123,B130,B131,B22,B26,B28,B29,B34,B37,B4,B45,B52,B57,B62,B68,B69,B70,B81,B94,C14,C19,C28,C30,C41,C44,C47,C53,C59,C6,C63,C67,C77,C83,D1,D7 |
Chr8:5686799 |
A |
ATC |
2bp_insertion | frameshift_variant | 101 | A1,A11,A13,A15,A19,A4,A5,A6,B1,B102,B113,B114,B115,B117,B118,B120,B127,B130,B131,B132,B134,B135,B136,B14,B140,B19,B2,B20,B26,B30,B32,B36,B38,B39,B41,B45,B47,B48,B50,B51,B52,B54,B55,B57,B59,B61,B71,B72,B77,B78,B79,B80,B81,B83,B85,B9,B91,B97,C10,C12,C14,C17,C26,C28,C3,C30,C31,C33,C34,C36,C39,C42,C45,C49,C5,C50,C51,C52,C57,C58,C6,C63,C64,C65,C66,C70,C74,C75,C76,C77,C78,C83,C84,C9,D10,D11,D3,D4,D6,D7,D8 |
Chr8:5686803 |
TG |
T |
1bp_deletion | frameshift_variant | 165 | A1,A11,A13,A15,A19,A20,A23,A25,A4,A5,A6,B1,B101,B102,B108,B11,B113,B114,B115,B117,B118,B119,B120,B122,B123,B127,B128,B129,B130,B131,B132,B133,B134,B135,B136,B138,B139,B14,B140,B16,B17,B19,B2,B20,B21,B23,B26,B27,B29,B30,B31,B32,B35,B36,B38,B39,B40,B41,B45,B46,B47,B48,B50,B51,B52,B53,B54,B55,B57,B58,B59,B61,B65,B66,B68,B7,B70,B71,B72,B73,B76,B77,B78,B79,B80,B81,B83,B84,B85,B88,B9,B91,B92,B93,B97,B98,C10,C12,C14,C15,C17,C18,C20,C21,C25,C26,C27,C28,C3,C30,C31,C32,C33,C34,C35,C36,C39,C42,C43,C45,C46,C47,C48,C49,C5,C50,C51,C52,C56,C57,C58,C59,C6,C61,C62,C63,C64,C65,C66,C68,C70,C71,C73,C74,C75,C76,C77,C78,C8,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D3,D4,D6,D7,D8,D9 |
Chr8:5686806 |
AG |
A |
1bp_deletion | frameshift_variant | 167 | A1,A11,A13,A15,A19,A20,A23,A25,A4,A5,A6,B1,B101,B102,B108,B11,B113,B114,B115,B117,B118,B119,B120,B122,B123,B127,B128,B129,B130,B131,B132,B133,B134,B135,B136,B138,B139,B14,B140,B16,B17,B19,B2,B20,B21,B23,B26,B27,B29,B30,B31,B32,B35,B36,B38,B39,B40,B41,B45,B46,B47,B48,B50,B51,B52,B53,B54,B55,B57,B58,B59,B61,B62,B65,B66,B68,B7,B70,B71,B72,B73,B76,B77,B78,B79,B80,B81,B83,B84,B85,B88,B9,B91,B92,B93,B97,B98,C1,C10,C12,C14,C15,C17,C18,C20,C21,C25,C26,C27,C28,C3,C30,C31,C32,C33,C34,C35,C36,C39,C42,C43,C45,C46,C47,C48,C49,C5,C50,C51,C52,C56,C57,C58,C59,C6,C61,C62,C63,C64,C65,C66,C68,C70,C71,C73,C74,C75,C76,C77,C78,C8,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D3,D4,D6,D7,D8,D9 |
Chr8:5686855 |
AT |
A |
1bp_deletion | frameshift_variant | 1 | B85 |
Chr8:5686855 |
AT |
A |
1bp_deletion | CDS_variant | 1 | B85 |
Chr8:5686927 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C22 |
Chr8:5686935 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B1,B35,B74,C25,D10 |
Chr8:5686968 |
GC |
G |
1bp_deletion | frameshift_variant | 6 | B9,C10,C14,C30,C34,C52 |
Chr8:5686971 |
A |
AT |
1bp_insertion | frameshift_variant | 6 | B9,C10,C14,C30,C34,C52 |
Chr8:5687003 |
CG |
C |
1bp_deletion | frameshift_variant | 15 | A11,A13,B117,B136,B38,B39,B4,B61,B81,B95,B98,C51,C52,C7,D3 |
Chr8:5687032 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。