当前解析结果
SmilChr08G000784| 统一新 Gene ID | SmilChr08G000784 |
|---|---|
| 名称 | SmilChr08G000784 |
| 描述 | uncharacterized SmilChr08G000784 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 5766660 - 5767643 / - |
| NCBI Gene ID | LOC131000365 |
|---|---|
| GeneID | 131000365 |
| locus_tag | - |
| NCBI Name | LOC131000365 |
| 原始查询 | SmilChr08G000784 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:839485]; symbol=AT1G02570; hit=AT1G02570; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:839485]; symbol=AT1G02570; hit=AT1G02570; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G02570 (AT1G02570)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:839485] identity=34.2; qcov=0.737; evalue=2.13e-29; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131000365 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057782221.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.80000 | XP_057782221.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057782221.1 |
| 4 | Nucleus membrane | 核膜 | 0.20000 | XP_057782221.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057782221.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:5766805 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B134,B31,C23,C51 |
Chr8:5766882 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A15 |
Chr8:5766908 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B53,B56,B96,C19 |
Chr8:5766974 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B88 |
Chr8:5766979 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B134,B31 |
Chr8:5766980 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C78,C9 |
Chr8:5767056 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C4 |
Chr8:5767095 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B13 |
Chr8:5767213 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B60 |
Chr8:5767220 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A4 |
Chr8:5767425 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B115,B23,C16,C75,C80 |
Chr8:5767448 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A15 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。